Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2140 ATGGCAGTTTCACTCTCATCCCTCACATCCTCCCTCTCTTCACTCTCCTTCTCCTCTCACATTTCCCACAAACCAAACACTAGCACCTTCTCTTCGCTCTCCCTCTCGCGCTTCCCCACAAAAACAACAACAACCCCATCCATCGTTATCGCAGCCACCGTCGCTGCTTCTCCGGCGGAGCCGGAAACCGCGGAACTCAGGAAGTTCGTGAAGTCGAGGCTTCCCGGCGGATTTGCGGCTCAGACCATCATCGGCACCGGTCGAAGGAAGTCCGCCATCGCTCGTGTTGTTCTTCAAGAAGGAACGGGGAAATTCATCATTAATTACCGCGATGCTAAGGAATATCTTCAGGGAAATCCGTTGTGGCTTCAATACATTAGGGTGCCCTTAATAACTTTGGGATATGAAAGTAGTTATGATATTTTTGTCAAAGCTGAGGGTGGTGGCCTCTCTGGTCAGGCTCAAGCAATCTCCCTTGGTATTGCTCGTGCCTTGCTGAAGGTCAGCGAAGATCATAGAGCACCTTTGAGACAGGAAGGGCTTCTGACCAGAGATTCTAGAGTGGTTGAGAGGAAGAAACCTGGTCTGAAGAAAGCTCGGAAAGCCCCTCAGTATTCCAAACGTTGA 627 0.5056 MAVSLSSLTSSLSSLSFSSHISHKPNTSTFSSLSLSRFPTKTTTTPSIVIAATVAASPAEPETAELRKFVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIRVPLITLGYESSYDIFVKAEGGGLSGQAQAISLGIARALLKVSEDHRAPLRQEGLLTRDSRVVERKKPGLKKARKAPQYSKR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2140 208 MobiDBLite consensus disorder prediction 193 208 - -
Dod08g2140 208 SUPERFAMILY Ribosomal protein S5 domain 2-like 82 208 IPR020568 -
Dod08g2140 208 ProSitePatterns Ribosomal protein S9 signature. 147 165 IPR020574 GO:0003735|GO:0005840|GO:0006412
Dod08g2140 208 PANTHER RIBOSOMAL PROTEIN S9 63 208 IPR000754 GO:0003735|GO:0005840|GO:0006412
Dod08g2140 208 PANTHER 28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL 63 208 - -
Dod08g2140 208 MobiDBLite consensus disorder prediction 185 208 - -
Dod08g2140 208 Gene3D - 74 208 IPR014721 -
Dod08g2140 208 MobiDBLite consensus disorder prediction 17 39 - -
Dod08g2140 208 Pfam Ribosomal protein S9/S16 87 208 IPR000754 GO:0003735|GO:0005840|GO:0006412
Dod08g2140 208 Hamap 30S ribosomal protein S9 [rpsI]. 78 208 IPR023035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2140 Dod-Chr8 49103944 49108213 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2140 K02996 - gmx:100305975 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2140 08 49103944 49108213 Dod08g2140 08 49103944 49108213 ECH