Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2074 ATGTTGTTGGTAGAAGGTTACAATGAGTTAGCATACTGGTCACCTCTATCTGGGTTCTTAGAGAACCTTGCCAACCATGATGAGATGAAGACAATAACCACAACAACTAGTACTGATGGCTTGCAAGCAGTGCCAAAAGGTTGGGTTTACAGTACTGAGGGAAGGGCCTTGAAGATAGGGGTCCCAGCTGGGGATCCATGTCCTCAGTTTGTGAATGTGAGCTATGATAAGAGGCTGAATGAAACTCACATCACAGGTTTCTCAATCAATGTTTTTGAAGCAGTAGTGAAAAGCCTCCCTTACCACCTTGCTTTTGATCTAGTGCCATTTTATGGCTCTTATGATCAAATAGTTGAGCAAGTGAACAATAAGGCTTTTGATGCTGCTGTTGGAGATATACAAATAATTGAAAACAGATATGCATTTGCGGAATTTTCTCATCCATATATTCCATCTGGCATTGACATGGTAGTAAAAGTGAAGCCAGATAGATCCAAAGAAACCTGGATGTTCATGGAAGCTTTCACAAAAGAAATGTGGTTGCTAATGGCAGCAATGCACTTGTTCGTAGCATTTGTTATCTGGTTGATTGAGCGGGAAGAGAATTCAGAGCTTAAAGGGTTCGATGCCATGCTGTGGTTTTCTGTCTCCATATTATTCTCTGTACCCGGTTCGGCCCTTGCAATTGACATATCCCGGGCAACCTTAAAAGCAATAGAAAGTGGCGAAGTGCAAAGCTTAGAAGAGGAGATGCTCTCCACCACAGACTGTGGATCTTCAAATAGCAAAATTCAAAATGTGAAACTTGGTCCTCAGCCATTCTTTGGACTATTTGGCATTTGTGGAACCATTGCTGCCTTCGGTTTGTTAGTCACCATCATTCATTTTGTTGGAAGTCATGCAAAGACATTTATGAACTACTTAGAAGGAACATTGTTACTAAGAGGATTAAGGGTGGCAAAATCTTGTGTTGTAAATCATCTAAGCAAGTACATAAGAAGTTCCCCTGCCCAAGATGTAAATAGCCCTAGGAATATACCAGCTAACAATGAGCAAAATCTAGGAAACATTGAGTTACCAATACCTCATCACTCATGA 1098 0.4098 MLLVEGYNELAYWSPLSGFLENLANHDEMKTITTTTSTDGLQAVPKGWVYSTEGRALKIGVPAGDPCPQFVNVSYDKRLNETHITGFSINVFEAVVKSLPYHLAFDLVPFYGSYDQIVEQVNNKAFDAAVGDIQIIENRYAFAEFSHPYIPSGIDMVVKVKPDRSKETWMFMEAFTKEMWLLMAAMHLFVAFVIWLIEREENSELKGFDAMLWFSVSILFSVPGSALAIDISRATLKAIESGEVQSLEEEMLSTTDCGSSNSKIQNVKLGPQPFFGLFGICGTIAAFGLLVTIIHFVGSHAKTFMNYLEGTLLLRGLRVAKSCVVNHLSKYIRSSPAQDVNSPRNIPANNEQNLGNIELPIPHHS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2074 365 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 8 222 - -
Dod08g2074 365 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 224 320 - -
Dod08g2074 365 MobiDBLite consensus disorder prediction 336 356 - -
Dod08g2074 365 SMART GluR_14 56 254 IPR001320 GO:0015276|GO:0016020
Dod08g2074 365 MobiDBLite consensus disorder prediction 336 365 - -
Dod08g2074 365 Pfam Bacterial extracellular solute-binding proteins, family 3 81 165 IPR001638 -
Dod08g2074 365 PANTHER GLUTAMATE RECEPTOR 8 222 - -
Dod08g2074 365 PANTHER GLUTAMATE RECEPTOR 224 320 - -
Dod08g2074 365 Gene3D - 50 180 - -
Dod08g2074 365 SUPERFAMILY Periplasmic binding protein-like II 40 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2074 Dod-Chr8 48184382 48187506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2074 5 223 Ion Channels AT5G27100 33.761 5.39e-39 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2074 - - gmx:100781045 333.183