Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2062 ATGGAACGAGAACACGAACAAGAAGAAGAAGCTCTGCACTCTCAGCTTTCTATTACTACGCTTCCTCCCGGTTGCCGGTTCCACCCTTCTGAGCAGCTTCTGTTACGGTACTATTTAACAAACAAGAACACCACCACCGGGAACCGGAACGGGAGCGAGGATTTTAACGGTTCTGATTTGATCGGGGAGGTTGATCTCTACGGTTACGACCCGTCCGAGTTGCCGGAATCGGCGTGCTTTGCGTACGGCTGCGGAGGGAGGAGTAGGCACTGGTACTGTTTCACAAGCGTTGTTAGGGTTTCGAGGAGGAGGAAGGCGAAGAGTGGGTTTTGGATAAGGAAGGGAAATGTCAGGAACGTTAATGGTGGTGGTGGTGGGAACGTGGTTTTGGGGACGAGGAAGAGGTTTGTTTTCTATTCGGGGGAATCGCGTAGGAGTGCTGTTAGGACGAATTGGGTTTTGTATGAGTACGCATTGGTTGATCATATCGTGGCTTCTTTCGTCCTTTGCCGGGTATTTGCTAAACCTAGTTGTAAGAATAGTGCATCAGATATTGGCTTGAGTTATGCAGAAGAAAGTGTATCAGCAGTACGTCACATTGGTATTCAGCATGATGAGCATGTTAGATCTGATGTTGAATTATGTGATGATAGCTCTGTTGACAGAAAGAATGAGATTTCAGTACATCCACAGAGATGTGCTGCTGAAAACAATGATCATCAAGTTATAAATAGAAATGTTTCTGTTGCTACTTTCCAACATTCTGTGGATCCTCAGGGCAGTCAGCAGCTGTCAATTGCAAACTTCTACATCAGCAATAATCTGACAAGTCTAGTCAGAAATGGGGCTATCAGTATTGGAAGTCAATTAGCATTCTATCTTTGCAAATTGCAACTACTTTTTTTTTTTTTAATTTGCAAAATTTTACAACTCATTTAG 939 0.4409 MEREHEQEEEALHSQLSITTLPPGCRFHPSEQLLLRYYLTNKNTTTGNRNGSEDFNGSDLIGEVDLYGYDPSELPESACFAYGCGGRSRHWYCFTSVVRVSRRRKAKSGFWIRKGNVRNVNGGGGGNVVLGTRKRFVFYSGESRRSAVRTNWVLYEYALVDHIVASFVLCRVFAKPSCKNSASDIGLSYAEESVSAVRHIGIQHDEHVRSDVELCDDSSVDRKNEISVHPQRCAAENNDHQVINRNVSVATFQHSVDPQGSQQLSIANFYISNNLTSLVRNGAISIGSQLAFYLCKLQLLFFFLICKILQLI* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2062 312 SUPERFAMILY NAC domain 16 175 IPR036093 GO:0003677|GO:0006355
Dod08g2062 312 Gene3D NAC domain 30 179 IPR036093 GO:0003677|GO:0006355
Dod08g2062 312 ProSiteProfiles NAC domain profile. 21 175 IPR003441 GO:0003677|GO:0006355
Dod08g2062 312 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 18 255 - -
Dod08g2062 312 Pfam No apical meristem (NAM) protein 22 159 IPR003441 GO:0003677|GO:0006355
Dod08g2062 312 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2062 Dod-Chr8 48055813 48061997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2062 17 175 NAC Transcription Factor Family AT1G69490 32.571 1.26e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod08g2062 NAM 1.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2062 - - aip:107605653 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2062 08 48055813 48061997 Dod08g2062 08 48055813 48061997 ECH