Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod08g2060 | ATGAAGGCAAGCATAATGCTTGCAAAGAATCGAAAGTATGCTGCTATATTAGCATTTGATGTCAAAGTCACTCCTGAGGCTAGGGAACTTGCAGACGAATTGGGTGTGAAAATTTTTATTGCTGATGTATTTTACCAGCTGTCTGATCAATTTAAGGCCTATAGTGAAAGCATTAATGCAGAGGAAAAGAGAGAAGCTGCTGATCAGACAGTCTTCCCTTGTGTACTGAAAATTTTACCTGATTGCATTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATGTGCTTGAAGGCATAGCAAAGGTCGGAACTCCTATATGTATTCCTTCTAGAGAGTTTGTTGACATCGGTCGCATTGCTTCCATTCAATATAACCATAAGCCAGTTGATGGTGCAAAGAAAGGGCAGCAAATAGCCATTAAGATTGTTGGTAGCCACCCTGAGGAGCAACATAAAATGTATGGGAGGCATTTTGATAAAGATGATGAACTTGTAAGTCATATTTCAGAGGAATATACTCCTGATCGGGCTGATATGACCAAAGATGAATGGAACCTTCTCATGAAATTGAGAAATGTTTTCAAGATACAACGAGGAGGCCTGATGTAG | 612 | 0.3954 | MKASIMLAKNRKYAAILAFDVKVTPEARELADELGVKIFIADVFYQLSDQFKAYSESINAEEKREAADQTVFPCVLKILPDCIFNKKDPIVLGVDVLEGIAKVGTPICIPSREFVDIGRIASIQYNHKPVDGAKKGQQIAIKIVGSHPEEQHKMYGRHFDKDDELVSHISEEYTPDRADMTKDEWNLLMKLRNVFKIQRGGLM* | 204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod08g2060 | 203 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 1 | 65 | IPR036925 | - | |
| Dod08g2060 | 203 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 1 | 198 | IPR015760 | - | |
| Dod08g2060 | 203 | Gene3D | - | 1 | 58 | IPR036925 | - | |
| Dod08g2060 | 203 | Pfam | Translation-initiation factor 2 | 5 | 52 | IPR023115 | - | |
| Dod08g2060 | 203 | Pfam | Elongation factor Tu domain 4 | 73 | 165 | IPR029459 | - | |
| Dod08g2060 | 203 | SUPERFAMILY | Translation proteins | 71 | 198 | IPR009000 | - | |
| Dod08g2060 | 203 | Gene3D | Translation factors | 66 | 198 | - | - | |
| Dod08g2060 | 203 | PANTHER | PHOTOSYSTEM II PROTEIN D1 | 1 | 198 | - | - | |
| Dod08g2060 | 203 | CDD | IF2_aeIF5B_IV | 74 | 169 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod08g2060 | 1 | 198 | Eukaryotic Initiation Factors Gene Family | AT1G76810 | 66.502 | 5.52e-85 | 271 |