Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2059 ATGGAGTACGAGAGCTCACTGCAGCAGGCAGCGGAATCGGAGAAGAAGTCGCTTGTGGTCGGCAACGGCTCCTCCTCCGAGGAGTCCCCGCCTCCAGTGCCGGACGACAATGCCGCCGTCGCCGGCAGGAAGAAGGGTAAAAGGGAGGGCGAGGATTATGTTGTTGTTGTCTTTGCTGGGAATAAGACGAAGGGTGGTGGTGATGGTAGGAGGTGTGTGTTCACTGCATCCAGTTTTGGTTTGCTTGGTGATGATGAGGTGTTAGGGCTCTCCGGTAAGGATGAGAAGAATGTTTCGTTGGTTGCATTTTCGGGTAAGAAGAAGAAGTCTTCTAGAAAGAGTAGTAGTATTATTGCTGCTAATGTGCGTGACGAAACTGGGTTTGGGAGTGAAAGTGTAGATGATGATGTTGTTGATGTTGAGCATGAGGAGCTACCTGGTTTGGAAGTCAGTAATACTACTGTTGCTGCTGCTGACAGCAACAATGTGAGTAGTAAGAGTGAAGAAGAGGTCACTGCAATTTCGAAGAACAAGAGGAGGAAGAATAAGAAGAAGAAGAATAAGAGTGTAAGAACTGCCCAGGAGGAGGAAGATTTGGACAAGATTCTTGCAGAGCTTGGCCAAGGCCCCATAATAGCAAAGCCTTACGATGCTCCTCCTCCTCCGCCGCCACAGGATGATGATGCTTCGGGCGAAAAGGAGGGGGAAGATGAGGCTGTAGAGTCTTCTGCTGCTGCAAATGAGAAGAAGAAAAAGAAGAAGAAGAAGAAGGTTGCTGCTATCGCCGCCGCCGGTGGAAGCGCACCGGAAAATGAAACCAAGGAAGCCGCTAAAGCAGCAGGCGAGAAGAAGAAAGTGCCAAAGCACGTCAGGGAGATGCAAGAGGCATTAGCTCGAAGAAAAGAGGAGGAAGAAAGGAAGAAGAGAGAAGAGGAGGAGAGGTTAATGAAGGAAGAAGACGAACGGCGTAGGCAGGAGGAACTTGAGAGAGAGGCAGAGGAGGCGAGGCGCAGGAAGAAGGAGAAAGAAAAGGAGAAGCTCCAGAGGAAGAAGCAAGAAGGCAAGCTCTTAACTTCTAAGCAGAAGGAAGAAGCCCGCCGATTGGAGATAATGAGGAAGCAGTTTCTGAATAATAGCACGTGGGATGTGATGACTCTCCCCGCTGCTCTTGCTAAAAGGCCCGTATATCAGCCAAAGAAGCCGAAACCAACCCATCATCATCAACAGAGTGGTGCTCCTGCTGCCGCGGATCCAGAACAGGTTGAAGAAGAGGAGGTGGAGGAGAAAGTTGAACTTCTTCGTAAAGCTTGTGGTGAAGATGATAATGAAGAAGAAGAAGACTTGGAGGAGGATGAATGGGATGCAAAAAGCTGGGATGGTGATGATGTTATTCTCAATGCCAAAGGTGCATTTGCTGATGAAGAGGAGGTTGACTCCGAGACTGAATCAGTTGTCAAACAGGAGACAAAAACTGCTGTAACTGCTGCTCACACTGCTGGTACTACATTGCCTATGGAAACACCAGAGTCTGCTGTGCCTCCTAAGCTGCTACGTGAAGGAAACCTCCGCTCCCCAATTTGCTGTATAATGGGACATGTGGATGCTGGCAAAACCAAGCTGTTGGATTTCATTCGAGGTACTAATGTTCAGGAGGGTGAGGCTGGTGGGCACAAACCATTTACGAAATTAAGGTCTAGGGGTTCAGCCTTGAGTGATATTGTAATTTTGGTTGTTGACATTACGCGTGGCTTAAAGCAACACACAACAGAAAAAACAACCAAAAAAACAACAGAAGAAACAATAGAAGAAACAACAACAGAGCTACTCAATCTATTAAAAAACAGGAATACAGAATTCATTATTGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACATGTCGCAATTCCCCAATTGTTAAAGCGATGAAGCAGCAGACTAAGGATGTTTCTAGTGAGTTCAATATGAGGGTCACTCAGATTATTACTCAATTCAAGGAACATGGGCTAAATACTGCCTTATATTATAAAAACAAGGAAATGGGAGAAACAGTCAACATTGTTCCTACTAGTGCAATAAGTGGTGAAGGAATTCCAGATTTGTTATTGCTGTTGGTTCAGTGGACTCAAAAAACAATGGTTGACAAACTTAGTTATAGTGAAGAAGTGAAGTGTACGGTCTTGGAGGTCAAGGTTCTTGAAGGCCATGGAACTACTCTTGATGTTGTTCTAGTAAACGGTGTTCTTCATGAAGGAGATCAGATAGTTGTCTGCGGAATGCAGGGGCCAATTGTCACAACAATTCGAGCTTTATTGACACCACATCCAATGAAGGAACTTCGTGTTAAGGGAACATATCTCCATCATGAAGAAATCAAAGCTGCAATGGGTATAAAGATCTCTGCCCGGGGTCTTGAACATGCTATCGCTGGCACTGATTTATATGTGGTGAAGATTGATGATGATTTGGAAGATGTTAAAGAGGTTGCAATGGAAGATATGAGGTCAGTCATGAACAGGATTGACACAACTGGTGTGGGAGTTTGTGTACAAGCGTCTACCCTTGGCTCATTGGAAGCACTACTGGAGCTTTTTGAAATCAGAAGTGAAAGTTCCTGTTAG 2625 0.4568 MEYESSLQQAAESEKKSLVVGNGSSSEESPPPVPDDNAAVAGRKKGKREGEDYVVVVFAGNKTKGGGDGRRCVFTASSFGLLGDDEVLGLSGKDEKNVSLVAFSGKKKKSSRKSSSIIAANVRDETGFGSESVDDDVVDVEHEELPGLEVSNTTVAAADSNNVSSKSEEEVTAISKNKRRKNKKKKNKSVRTAQEEEDLDKILAELGQGPIIAKPYDAPPPPPPQDDDASGEKEGEDEAVESSAAANEKKKKKKKKKVAAIAAAGGSAPENETKEAAKAAGEKKKVPKHVREMQEALARRKEEEERKKREEEERLMKEEDERRRQEELEREAEEARRRKKEKEKEKLQRKKQEGKLLTSKQKEEARRLEIMRKQFLNNSTWDVMTLPAALAKRPVYQPKKPKPTHHHQQSGAPAAADPEQVEEEEVEEKVELLRKACGEDDNEEEEDLEEDEWDAKSWDGDDVILNAKGAFADEEEVDSETESVVKQETKTAVTAAHTAGTTLPMETPESAVPPKLLREGNLRSPICCIMGHVDAGKTKLLDFIRGTNVQEGEAGGHKPFTKLRSRGSALSDIVILVVDITRGLKQHTTEKTTKKTTEETIEETTTELLNLLKNRNTEFIIALNKVDRLYGWKTCRNSPIVKAMKQQTKDVSSEFNMRVTQIITQFKEHGLNTALYYKNKEMGETVNIVPTSAISGEGIPDLLLLLVQWTQKTMVDKLSYSEEVKCTVLEVKVLEGHGTTLDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHEEIKAAMGIKISARGLEHAIAGTDLYVVKIDDDLEDVKEVAMEDMRSVMNRIDTTGVGVCVQASTLGSLEALLELFEIRSESSC* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2059 874 Coils Coil 286 360 - -
Dod08g2059 874 Pfam Elongation factor Tu GTP binding domain 555 711 IPR000795 GO:0003924|GO:0005525
Dod08g2059 874 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B-LIKE 163 556 - -
Dod08g2059 874 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B-LIKE 556 866 - -
Dod08g2059 874 Gene3D Translation factors 722 844 - -
Dod08g2059 874 MobiDBLite consensus disorder prediction 435 454 - -
Dod08g2059 874 MobiDBLite consensus disorder prediction 153 170 - -
Dod08g2059 874 MobiDBLite consensus disorder prediction 1 48 - -
Dod08g2059 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 790 IPR027417 -
Dod08g2059 874 CDD IF2_eIF5B 525 712 - -
Dod08g2059 874 Gene3D - 521 555 IPR027417 -
Dod08g2059 874 Gene3D - 556 721 IPR027417 -
Dod08g2059 874 MobiDBLite consensus disorder prediction 105 364 - -
Dod08g2059 874 Coils Coil 594 614 - -
Dod08g2059 874 MobiDBLite consensus disorder prediction 392 430 - -
Dod08g2059 874 MobiDBLite consensus disorder prediction 1 31 - -
Dod08g2059 874 CDD aeIF5B_II 723 833 - -
Dod08g2059 874 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 163 556 IPR015760 -
Dod08g2059 874 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 556 866 IPR015760 -
Dod08g2059 874 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 824 866 IPR036925 -
Dod08g2059 874 MobiDBLite consensus disorder prediction 275 364 - -
Dod08g2059 874 Pfam Elongation factor Tu domain 2 738 813 IPR004161 GO:0005525
Dod08g2059 874 MobiDBLite consensus disorder prediction 189 203 - -
Dod08g2059 874 MobiDBLite consensus disorder prediction 440 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2059 Dod-Chr8 48036202 48042327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2059 191 866 Eukaryotic Initiation Factors Gene Family AT1G76810 52.357 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2059 K03243 - gmx:100814875 733.791