Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod08g2047 | ATGAACACATCGGAGAGCCACAACTCAGAAATGCATGCTTGCACTCTGCCTTACAGTGATCATAATTTCACACACAACGAGGATAATGCTAAGGCAGTGCAAGAAGCAGCTTCTGCTGGGATTCACAGCGTTGAGAAGCTCATGGACATGATCTCTGAACTCAGCAAGAACACACAACAACAACAAGGTGGTGGTGATGATAATATTAATGATGATTCACATGAATTTGGAACCGTTGCAGATGTTGCTGTGAACAAGTTCAGAGAGGTTATTTCTCTGCTTGACAAGCCAAGAAAAACGGGCCATGCTCGTTTCAGAAGGGCCCAAACAAGTGTTCCACCAGCTCCTACTCTTCAATTGCAGCAAATGGATTTTGTAAAAGAAACACGAGATGAGCAGAAGATTGAACAAGCTTTTTCTGCTTTCAAGGTTTATTGCCCTACACCGATTCTGCGTCCACCTCCTCTGTCTCAAAGGAAGAACCATGATTTCCCTTTAACGTTTTATCAGCAGCAAAAGAATGAATCAAATAATGGTTCTTCTACTATTGAGTTTTCGGGGTTGCCACCATCAGCTTCTGCTGCAAACTCTTATATGTCAACGTTGACTGGGGACAGTGAGAGTTTGCAACGGCCTTGTAGTTCTTATTCTGGGTTCCAAATCACTCATGTGTCATCATCACTTCAGGGCTCTTCTTATATGCGCAAACCACCTCTCTCTTCGGCTTCTTTGAAGAGGAAGTGCAATCCAATGGATGTTCCTAATAATGTCAAGTGTGCATCATCCTCTGCTAAGTGCCATTGCTCTAAAAAGAGGAAATTGAAGCTTAGGAGAGTCGTAAGAGTGCCAGCTATTAGTTCCAAAAATGCTGATATCCCACCGGATGATTACTCATGGAGAAAGTATGGACAAAAACCCATTAAGGGCTCTCCCCACCCTAGAGGTTACTACAAGTGCACCAGCGTGAGAGGCTGCCCTGCACGCAAACACGTGGAGCGTGCTGTGGACGATACAAACATGCTTGTTGTCACCTACGAAGGAGAACACAATCACTCACTTGCACCTTCGGAGCTGGCTAATGCCGTTGTCCTCGAATCATCTTAA | 1104 | 0.4457 | MNTSESHNSEMHACTLPYSDHNFTHNEDNAKAVQEAASAGIHSVEKLMDMISELSKNTQQQQGGGDDNINDDSHEFGTVADVAVNKFREVISLLDKPRKTGHARFRRAQTSVPPAPTLQLQQMDFVKETRDEQKIEQAFSAFKVYCPTPILRPPPLSQRKNHDFPLTFYQQQKNESNNGSSTIEFSGLPPSASAANSYMSTLTGDSESLQRPCSSYSGFQITHVSSSLQGSSYMRKPPLSSASLKRKCNPMDVPNNVKCASSSAKCHCSKKRKLKLRRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPHPRGYYKCTSVRGCPARKHVERAVDDTNMLVVTYEGEHNHSLAPSELANAVVLESS* | 368 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod08g2047 | 367 | ProSiteProfiles | WRKY domain profile. | 288 | 354 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod08g2047 | 367 | PANTHER | WRKY TRANSCRIPTION FACTOR NTEIG-D48 | 27 | 367 | - | - | |
Dod08g2047 | 367 | SMART | WRKY_cls | 293 | 353 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod08g2047 | 367 | Pfam | WRKY DNA -binding domain | 295 | 351 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dod08g2047 | 367 | Gene3D | WRKY domain | 277 | 354 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dod08g2047 | 367 | Pfam | Plant zinc cluster domain | 245 | 291 | IPR018872 | - | |
Dod08g2047 | 367 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 27 | 367 | IPR044810 | GO:0003700 | |
Dod08g2047 | 367 | SUPERFAMILY | WRKY DNA-binding domain | 289 | 353 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod08g2047 | Dod-Chr8 | 47839181 | 47846503 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod08g2047 | 32 | 314 | WRKY Transcription Factor Family | AT4G24240 | 46.154 | 1.47e-65 | 208 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Dod08g2047 | WRKY | 6.7e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod08g2047 | - | - | lja:Lj0g3v0162929.1 | 365.54 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod08g2047 | 08 | 47839181 | 47846503 | Dod08g2047 | 08 | 47839181 | 47846503 | ECH |