Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2047 ATGAACACATCGGAGAGCCACAACTCAGAAATGCATGCTTGCACTCTGCCTTACAGTGATCATAATTTCACACACAACGAGGATAATGCTAAGGCAGTGCAAGAAGCAGCTTCTGCTGGGATTCACAGCGTTGAGAAGCTCATGGACATGATCTCTGAACTCAGCAAGAACACACAACAACAACAAGGTGGTGGTGATGATAATATTAATGATGATTCACATGAATTTGGAACCGTTGCAGATGTTGCTGTGAACAAGTTCAGAGAGGTTATTTCTCTGCTTGACAAGCCAAGAAAAACGGGCCATGCTCGTTTCAGAAGGGCCCAAACAAGTGTTCCACCAGCTCCTACTCTTCAATTGCAGCAAATGGATTTTGTAAAAGAAACACGAGATGAGCAGAAGATTGAACAAGCTTTTTCTGCTTTCAAGGTTTATTGCCCTACACCGATTCTGCGTCCACCTCCTCTGTCTCAAAGGAAGAACCATGATTTCCCTTTAACGTTTTATCAGCAGCAAAAGAATGAATCAAATAATGGTTCTTCTACTATTGAGTTTTCGGGGTTGCCACCATCAGCTTCTGCTGCAAACTCTTATATGTCAACGTTGACTGGGGACAGTGAGAGTTTGCAACGGCCTTGTAGTTCTTATTCTGGGTTCCAAATCACTCATGTGTCATCATCACTTCAGGGCTCTTCTTATATGCGCAAACCACCTCTCTCTTCGGCTTCTTTGAAGAGGAAGTGCAATCCAATGGATGTTCCTAATAATGTCAAGTGTGCATCATCCTCTGCTAAGTGCCATTGCTCTAAAAAGAGGAAATTGAAGCTTAGGAGAGTCGTAAGAGTGCCAGCTATTAGTTCCAAAAATGCTGATATCCCACCGGATGATTACTCATGGAGAAAGTATGGACAAAAACCCATTAAGGGCTCTCCCCACCCTAGAGGTTACTACAAGTGCACCAGCGTGAGAGGCTGCCCTGCACGCAAACACGTGGAGCGTGCTGTGGACGATACAAACATGCTTGTTGTCACCTACGAAGGAGAACACAATCACTCACTTGCACCTTCGGAGCTGGCTAATGCCGTTGTCCTCGAATCATCTTAA 1104 0.4457 MNTSESHNSEMHACTLPYSDHNFTHNEDNAKAVQEAASAGIHSVEKLMDMISELSKNTQQQQGGGDDNINDDSHEFGTVADVAVNKFREVISLLDKPRKTGHARFRRAQTSVPPAPTLQLQQMDFVKETRDEQKIEQAFSAFKVYCPTPILRPPPLSQRKNHDFPLTFYQQQKNESNNGSSTIEFSGLPPSASAANSYMSTLTGDSESLQRPCSSYSGFQITHVSSSLQGSSYMRKPPLSSASLKRKCNPMDVPNNVKCASSSAKCHCSKKRKLKLRRVVRVPAISSKNADIPPDDYSWRKYGQKPIKGSPHPRGYYKCTSVRGCPARKHVERAVDDTNMLVVTYEGEHNHSLAPSELANAVVLESS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2047 367 ProSiteProfiles WRKY domain profile. 288 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g2047 367 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 27 367 - -
Dod08g2047 367 SMART WRKY_cls 293 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g2047 367 Pfam WRKY DNA -binding domain 295 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g2047 367 Gene3D WRKY domain 277 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g2047 367 Pfam Plant zinc cluster domain 245 291 IPR018872 -
Dod08g2047 367 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 27 367 IPR044810 GO:0003700
Dod08g2047 367 SUPERFAMILY WRKY DNA-binding domain 289 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2047 Dod-Chr8 47839181 47846503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2047 32 314 WRKY Transcription Factor Family AT4G24240 46.154 1.47e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g2047 WRKY 6.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2047 - - lja:Lj0g3v0162929.1 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2047 08 47839181 47846503 Dod08g2047 08 47839181 47846503 ECH