Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2045 ATGGAAATATTAATAATGCATCGTAACAAGTACGGCAAGAGGAGTCAATGGGCGTGCTACTCTTCCCTCCCCCCACCCACCCCCCCACACTTGCACTCACTCAAAGTGGACAATGGAAAGTGGATTACCCTTGGTTCACTGTCTCTTGCAGCATACTCTCAGAAGCATATGCTCATCTTCAAGTTCTTCCAAATGGGTGTATGCTGTCTTTTGGAGGATAGTACCAAGAAACTTTCCTCCTCCAAGATCATTAACTTGCTTTTTGTAGGTGGGAATTTGGAGGAACTGCTCTTGATCGATCCAAGGGGAATAAAAGAAACTGGGAGGAGTGGATGCTTGAATGACAGATTTGGAGCTGAAGTATTCTTCAAAATGTCTCATGAGGTTTACAATTATGGGGAGGGACTAATAGGGAAAGTGGCATCTGACAATAGTCACAAATGGGTTTACAGTGACACTCAAAATGGGCGTGAACCTAGCTACATTGGTTCATGGAATGCTTCAATTGATCGTCAACCAAAGGCATGGGAGTTTCAGTTCAATTCAGGTATTCAGACTGTTGCTGTCATTGCTGTTAGAGAAGGCTTAGTGCAACTAGGTTCATTTAATAAGATTGCAGAAGACCTCAACATAGTGCTGAACATACAAAGGAAGTTCAGCTATCTTCAAAGCATACCAGGAGTGTTTGCCATTCAAAGACCATACATACCTGTCCAACACCCATACATTGCCAAAACCAATTTCCATATGATGGAAAGCAATGAAATGGCTCTCTCTACCTACAACATGAACCAAATAGCAGGAGTCAACAGAATACTTGAAGAAAGATCTGACTACTTTTCCATGATAGCTATCAATATGGGAAGGAATATCCCACAAGATGGAACACAAGCGCCACCCCATTGGTCAGGTCCTCCTTCCTTGCCAAGCATGTCTTGCAGCCTAGGAGCTTTGCTATCAAGGCTTCCCACTGAAGTTCCACTTCCATCCTATAATCACCCTTCTCAAGTTCCTGGAACCAATAGGATCAACAGCACAGGCCAAAGGGTGAAGATTGAGGGGTGTGGATTCCATGTTGCTAATGATGGTGATCAGAAAGGCAAGGCCATGTCCTAA 1116 0.4373 MEILIMHRNKYGKRSQWACYSSLPPPTPPHLHSLKVDNGKWITLGSLSLAAYSQKHMLIFKFFQMGVCCLLEDSTKKLSSSKIINLLFVGGNLEELLLIDPRGIKETGRSGCLNDRFGAEVFFKMSHEVYNYGEGLIGKVASDNSHKWVYSDTQNGREPSYIGSWNASIDRQPKAWEFQFNSGIQTVAVIAVREGLVQLGSFNKIAEDLNIVLNIQRKFSYLQSIPGVFAIQRPYIPVQHPYIAKTNFHMMESNEMALSTYNMNQIAGVNRILEERSDYFSMIAINMGRNIPQDGTQAPPHWSGPPSLPSMSCSLGALLSRLPTEVPLPSYNHPSQVPGTNRINSTGQRVKIEGCGFHVANDGDQKGKAMS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2045 371 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 114 219 IPR025610 -
Dod08g2045 371 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 106 344 - -
Dod08g2045 371 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 106 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2045 Dod-Chr8 47807803 47811700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2045 124 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 38.614 2.80e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2045 - - gmx:100807289 363.614