Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2014 ATGAGCTGCAATGGTTGCCGAGTGCTCCGAAAGGGATGCAGCGACAGTTGCGCTTTGAGGTCGTGCCTGCAGTGGATCGAATCGCCCGAGTCACAAGCACATGCCACTCTCTTCCTCGCTAAGTTCTTTGGTCGTAGTGGCCTTTTGTCCTTTATCTCCTCCGTCCCAGAAACCAAACGACCCGCATTGTTTCAGTCTTTGTTATATGAAGGGTGTGGGCGAACAATAAATCCGGTGAACGGCGCGGTAGGGCTTCTCTTAAGCGGTAGCTGGCACATGTGCCAAGCTGCCGTGGACACAGTGCTCGCTGGAGGTGTTCTCCGCCCGTTGCCGGAGACATTCGCTGGAATTGTAATGCCAGCATTGGACCACACCACTGGTTCCAAAGACACTTCATACTCTCAATTGAGTCCCTTAGCGTTCATGCATGGGGTGGGAGAGATCATGATGAATCACAATAATTCAAGCTTGGATTCTGATCGTTACGCCTACACAACAAACACTAGAGTATTGAAGAGGGAATCGGCTATGTCATTGATTTCGAGTAGTGGGGAATCGGAGATACCAAGCTATGGTGACAATAAGAAAAGACAGGTTTTGAATTTGTTCATGTAA 615 0.4927 MSCNGCRVLRKGCSDSCALRSCLQWIESPESQAHATLFLAKFFGRSGLLSFISSVPETKRPALFQSLLYEGCGRTINPVNGAVGLLLSGSWHMCQAAVDTVLAGGVLRPLPETFAGIVMPALDHTTGSKDTSYSQLSPLAFMHGVGEIMMNHNNSSLDSDRYAYTTNTRVLKRESAMSLISSSGESEIPSYGDNKKRQVLNLFM* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2014 204 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Dod08g2014 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 204 - -
Dod08g2014 204 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Dod08g2014 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2014 Dod-Chr8 47363931 47366028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g2014 1 126 AS2 family AT3G49940 68.702 7.90e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod08g2014 LOB 2.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g2014 - - gmx:100796966 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2014 08 47363931 47366028 Dod02g0782 02 10160588 10161375 ECH
Dod08g2014 08 47363931 47366028 Dod05g1165 05 32803226 32804990 ECH
Dod08g2014 08 47363931 47366028 Dod06g0488 06 5958437 5959778 ECH
Dod08g2014 08 47363931 47366028 Dod08g2014 08 47363931 47366028 ECH