Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1990 ATGGCGGTGTTGTCAGAAATAAACGAGGACGGCGACAACGAGCTGGACGAGGAGCCCGGCGAGGTGATCGAATCGGCGCCGCCGCAGAAAGTCGGCGAGGAGAGGCAGCTCAGTAGCAGCAACTCGGCGGCGGGTGGGCTCAAGAAGAAGCTGCTCAAGCGCGGACTCGGTTGGGAAACCCCCGAATTCAACGACCAAGTCACTGTTCACTATGTTGGGAGTTTGGAAGATGGAACGAAGTTTGATTCCAGTAGGGATGGAGATCAGCCAGTGACTTTCACTCTTGGTCAAGGACAAGTGGCTGCTGGATTGGATCATGGGATAATCACCATGAAGAAGGGGGAGGTAGCATTGTTCACATTACCTGCTGAGTTGGGCGTTTCATCTCCCAACTCCAACTTGGTTAGGCAGTTTGAGGTGGAGCTCATTTCATGGATCAAAGTAGTGGATGTTTGCAAAGATGGTGGGATTATCAAGAAAATTATGGAGAAGGGTGCTGGGAACGAGCGACCCCGTGATCTAGATGAAGTCCTTGTGAAGTATCAGGTGGCGCTAGCTGATGACACTGTTGTTGCGGAAACACCAGAAAGAGGGGTTGAATTTCATGTGAAGGATGGTCATCTTTTTCTGGGATTGCCAAGAGTAATCATGAGTATGACAAAGGGAGAGAAGGCTAAATTAATTGTTCAACCTCAGTATGCCTTTGGGGAGGAGGGTAGAGAAGCTGGCAGTGGACTACATTCAATTCCTCCAAATTCAGTGCTGCATGTTAATATTGAGTTGGTGTCTTTCAAATCTGTCATAAATGTTACTGGTGACTTCATGGTGCTTAAGAAGATTTTGAAAGAAGGGGAGGGTGCTTTCACAGCGAATGAGGCTGCAAATGTTACAGTCAGCTATACAGCTACGCTAGAAGATGGAACTGTCTTTGAGAAAAGAGGAATTGGTGAAACACAGCCCTTAGAATTCATAACTGATGAAGAACAAGTGATTACTGGTCTAGACCAAGCAGTGGCAACGATGAAGAAGGGTGAGAGGGCCATAATTAGGATACACCCTAATTATGCATTTGGAAATGTCGAAGTAAGACGAGATTTAGCTGTTGTGCCACGAGGCTCACATGTAGTCTATGACATTGAGATGATAGACTTTATTAAGGAGAAAACACCTGTGGGAATTGAATAG 1185 0.4667 MAVLSEINEDGDNELDEEPGEVIESAPPQKVGEERQLSSSNSAAGGLKKKLLKRGLGWETPEFNDQVTVHYVGSLEDGTKFDSSRDGDQPVTFTLGQGQVAAGLDHGIITMKKGEVALFTLPAELGVSSPNSNLVRQFEVELISWIKVVDVCKDGGIIKKIMEKGAGNERPRDLDEVLVKYQVALADDTVVAETPERGVEFHVKDGHLFLGLPRVIMSMTKGEKAKLIVQPQYAFGEEGREAGSGLHSIPPNSVLHVNIELVSFKSVINVTGDFMVLKKILKEGEGAFTANEAANVTVSYTATLEDGTVFEKRGIGETQPLEFITDEEQVITGLDQAVATMKKGERAIIRIHPNYAFGNVEVRRDLAVVPRGSHVVYDIEMIDFIKEKTPVGIE* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1990 394 Gene3D - 34 148 IPR046357 GO:0003755
Dod08g1990 394 MobiDBLite consensus disorder prediction 1 43 - -
Dod08g1990 394 PANTHER PEPTIDYLPROLYL ISOMERASE 4 272 - -
Dod08g1990 394 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 293 385 IPR001179 GO:0003755
Dod08g1990 394 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 272 - -
Dod08g1990 394 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 289 382 IPR001179 GO:0003755
Dod08g1990 394 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 59 128 IPR001179 GO:0003755
Dod08g1990 394 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 168 262 IPR001179 GO:0003755
Dod08g1990 394 SUPERFAMILY FKBP-like 42 148 - -
Dod08g1990 394 Gene3D - 265 389 IPR046357 GO:0003755
Dod08g1990 394 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 64 265 IPR001179 GO:0003755
Dod08g1990 394 SUPERFAMILY FKBP-like 150 265 - -
Dod08g1990 394 SUPERFAMILY FKBP-like 275 390 - -
Dod08g1990 394 PANTHER PEPTIDYLPROLYL ISOMERASE 267 384 - -
Dod08g1990 394 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 267 384 - -
Dod08g1990 394 Gene3D - 149 264 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1990 Dod-Chr8 47032608 47036946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1990 30 388 Calmodulin-binding Proteins AT3G25230 53.825 1.56e-124 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1990 K09571 - gmx:100798382 556.599