Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1973 ATGACGTTCACCCTTCTCTTCTCCAACCGCAAAAACCTTCGCAGCACCAAAACCCATCATCATCTCCCAAGCAAAAACGACGTTGTCGATGGCTCGTCCTTCTCGGGCGCCGTGTTCAACCTCTCCACCACCGTCGTCGGCGCCGGCATCATGGCCCTCCCGGCCGCCGTGAAGCAATTGGGCCTCGTTCCGGGCCTAACCATGATAGTCCTCTGCGCAATGTTAACCGAATTCTCCATCAGCGTGCTCTTGAGGTTCACGCGGGTGTCGAAATCGTCGACGTATTCGGGAGTGGTTCGCGACGCGTTCGGTGGGGTTGGTCGGGTGCTGTTGCTGCTGTGCATCATCGTCAACAACATGGGAATGCTCGTCGTGTACATGGTCATTATCGGTGATGTGTTCTCAGGAACGTGGTCTGAGGGAGTCCACTATTCAGGGGTTCTGGAAGAATGGTTTGGTCAACGTTGGTGGTCAACACGCCCCGTCTTACTCTTGTTCACAACACTTCTAGTTTTCGTGCCCCTTCGCATTGTTCAGGCGTATTCACTAAGATACACATCAGCATTGTCTGTGGGGTTGGCAATTGTTTTTGTGGTGATAACAGCAGGTGTAGCAATTGTTAACTTTATTAAGGGAAACATCGGAATGCCACGCTTAATGCCAAAATTCACTGGCCAGGAATCCTTTTGGAAGCTTTTCACAACTATCCCTGTATTGATCACTGCTTACATTTGTCATCATAATGCTACCAGCCTATTTGGATTTCTGTTATTTGGGGAGAAAACACTGGACGATGTGCTTGCCAACTTTGATGGTGACCTTGGAGTTCCTTATGGCTCATTTCTCAATGATGTAGTTAGAGTCAGCTATGGCATTCACCTTATCCTTGTGTTCCCTATTGTTTTTTACTCACTTCGCCTCAATGTGGATGGTCTTCTGTTTCCTCATGCCATTCCTCTTTCATTTGACAACTGGAGATTCAATGTGGTGACCACAGTTCTCATGGCTTTCATTTTTGCTGGAGCCAATTTTGTTCCCAGCATATGGGATGCCTTCCAGTTCACAGGTGCCACAGCAGCCCTTTCTGCTGGATACATTTTTCCAGCTGCCATTTGTCTTAGGGACACTCGTGGGGTTGCAACAGAGAAAGACAAGCTATTATCTTGGTTGATGATACTTCTAGCTGTCTTATGTAGCACTGTGGCCATCTCTAGTGACTTGTATAGCATCTTCAATAGTGAAGCAGCAGCAGCAGCAGGAGGAACCTAA 1269 0.4815 MTFTLLFSNRKNLRSTKTHHHLPSKNDVVDGSSFSGAVFNLSTTVVGAGIMALPAAVKQLGLVPGLTMIVLCAMLTEFSISVLLRFTRVSKSSTYSGVVRDAFGGVGRVLLLLCIIVNNMGMLVVYMVIIGDVFSGTWSEGVHYSGVLEEWFGQRWWSTRPVLLLFTTLLVFVPLRIVQAYSLRYTSALSVGLAIVFVVITAGVAIVNFIKGNIGMPRLMPKFTGQESFWKLFTTIPVLITAYICHHNATSLFGFLLFGEKTLDDVLANFDGDLGVPYGSFLNDVVRVSYGIHLILVFPIVFYSLRLNVDGLLFPHAIPLSFDNWRFNVVTTVLMAFIFAGANFVPSIWDAFQFTGATAALSAGYIFPAAICLRDTRGVATEKDKLLSWLMILLAVLCSTVAISSDLYSIFNSEAAAAAGGT* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1973 422 PANTHER AMINO ACID TRANSPORTER 249 415 - -
Dod08g1973 422 PANTHER AMINO ACID TRANSPORTER 24 248 - -
Dod08g1973 422 Pfam Transmembrane amino acid transporter protein 31 251 IPR013057 -
Dod08g1973 422 PANTHER AMINO ACID TRANSPORTER AVT6A 249 415 - -
Dod08g1973 422 PANTHER AMINO ACID TRANSPORTER AVT6A 24 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1973 Dod-Chr8 46743213 46754342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1973 20 415 Amino Acid or Auxin Permease AAAP Family AT3G30390 54.098 1.73e-158 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1973 K14207 - gmx:100814034 650.588