LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod08g1951	ATGAAGCTAGATCATCAAGGCCAAATAGGTATGGATGCTGTTGCTGCAATTATCACCTTCATGCTATTCATGTCTTTATCATCTGCTGATGCAAAGCAAATACCACTTGGTTCATCACTATACCCTATTAATTCCCCTACTTCGTGGCCTTCCCCTTCTGGCCTGTATGCATTTGGTTTTTATCAGCAAGGCAGTGGTTATGCCATCGGGATTTGGTTGGTTGGCGGGAACAACACTACAGTGGTGTGGACTGCAAACCGGGATGATCCTCCAGTAACCTCAAATGCAAAGCTGCAACTAAGCATGGAGGGTAAGCTGCTTCTGCAGACGCAACAAGGACAAGAGAAGCTTATTGCTAATGCTAATGCAATTGCTTCCTCTGCTTCCATGCTTGACTCTGGAAACTTTGTACTATATGACAAGAATTCTAGTGTCATATGGCAGAGTTTTGATCACCCAACTGATACTTTGTTAGGTGATCAAACTCTAGCCTGTGGTGGTCAACTGCTCTCCAGTTCATCAAAGACTAACCACTCAACTGGACGGTTTGTTCTCAAAATGCAATTTGATGGATTTCTTGGTCTGTATCCAACCCACACAAATTGCTCAAGAATAGATGCTTATTTTAGTGCTCCTTCCTCCTATGGCATTGGTTTCGGTAAATGTGATCTTTGCCTCAACAGAAATGGCTCTTTGGTGATCGGGAAGGAATTTGATTTGGTGTCGATGCAGTATCTTTATAATGGTTCACCTCTTGCTAGCAACATCAACAACGAGAACAAGACAATTTATCGTGCAACACTGGATGTTGATGGATTTTTCCGGTTGTATGCTCATGATAGCAAAGATACTAGCAGCAGCAGCAAAGTACTATATTGGCCACCTAGTGAGAACGCGTGTGCGGTGTATGGGTTTTGTGGCTTTAACAGCTACTGCACATCGGATGACCAGAAACCATACTGCCTATGTCTTCCTGGATTTGACTTCATTGATCCGAATCAAATGACTCTTGGCTGCAAAAGGAACTTTTCAGAACCCAAGTGTAGCGATGGGACAGATAATACAAAGTTTTATAACATGGTCCTTGTGCCGAGTTTGGGGTGGGGTGATGCTCCTTATTTCGCGGCCAAAATGTCACGGAAAGAAGAATGCTCATCTTCATGTTTGGAAGATTGCAACTGTTGGGCTGCTCTTTATTGGAATAATAACTGCATCAAGCAGTACCCGCCTTTGAGATATGTTAGAAGAACAACAGTACCACGCTGGGCATTCATAAAGGTAGGAAATGAAACCCTTCATAGACCTGAGCTTCCTATGCCTGAGCCTGACCAACCACACCCAATCAAGAGTACTTGTAAGAAATCAATTGTGGAGATTATTCTTGTTATATTGAGTTTTGCTTTGCTTTTATGCTCAACTGTTGGAATCTCTAGCCATTTTATTTACAAGATCCGAGTTCTAAGGTACAAAAGGCTATTGGAGATTGGGGACTTCGGCCTGAATGAAGAGGTGGCTTTAAGGAGATTTTCATACAATGAGCTCAAGAAAGCAACAAATGGTTTCAAGCAAGAGTTGGGCAAGGGTTCATTTGGTGCAGTATACAAAGGGGCTTTGTACAGAGGCAAAAGTAGAAGAGTCATTGCAGTGAAGAGACTGGAGAAGTTAGTTGAAGAAGGAGAAAGGGAGTTTCAAGCAGAGTTGCGAGCCATTGGCAAAACACACCACAAGAACCTAGTTCGCTTGCTTGGCTTCTGTGTTGATGGTCCCAAAAGGCTTCTTGTATATGAGTACATGAGTAATGGATCCCTTGGGAATCTTCTCTTTGGGGATGTCATCACACGTCCAAGTTGGGATGATAGAGCAAGAATAGCACTAGACATTGCAAGAGGGATCCTCTATCTCCATGAAGAGTGTGAGGCACCAATTATTCATTGCGACATAAAGCCTCCAAACATCTTAATGGATGAATTCTGGATTGCTAAGATATCTGATTTTGGGCTAGCGAAGCTCCTGATGCCAGATCAAACGAGAACATTCACAGGTGTTAGAGGGACAAGGGGGTACTTGGCCCCAGAATGGCAAAGGAACACCCCAATAACAGTGAAGGCTGATGTTTATAGCTATGGAATAGTGCTGTTGGAAACCGTGTGTTGTAGGAGAAACATAGAAGTTAACAACATCTCGCAACCAGAGGAGATTCTTCTCTCTGGTTGGGCCTATCAGTGCTTTGTTGCTGGTGAGTTACATAAGCTTGTTCATTGGGAAACAGTGGAGAAAAATGTCTTGGAAAATATGGTAAAGGTGGCACTTTGGTGTATCCAAGATGAACCTGTTCTCCGGCCATCAATGAAGAGTGTGGTGATGATGTTGGAAGGGATTACAGAGGTAGCAATTCCTCCTTGCCCAACTACTAATTCCATGTGA	2424	0.4323	MKLDHQGQIGMDAVAAIITFMLFMSLSSADAKQIPLGSSLYPINSPTSWPSPSGLYAFGFYQQGSGYAIGIWLVGGNNTTVVWTANRDDPPVTSNAKLQLSMEGKLLLQTQQGQEKLIANANAIASSASMLDSGNFVLYDKNSSVIWQSFDHPTDTLLGDQTLACGGQLLSSSSKTNHSTGRFVLKMQFDGFLGLYPTHTNCSRIDAYFSAPSSYGIGFGKCDLCLNRNGSLVIGKEFDLVSMQYLYNGSPLASNINNENKTIYRATLDVDGFFRLYAHDSKDTSSSSKVLYWPPSENACAVYGFCGFNSYCTSDDQKPYCLCLPGFDFIDPNQMTLGCKRNFSEPKCSDGTDNTKFYNMVLVPSLGWGDAPYFAAKMSRKEECSSSCLEDCNCWAALYWNNNCIKQYPPLRYVRRTTVPRWAFIKVGNETLHRPELPMPEPDQPHPIKSTCKKSIVEIILVILSFALLLCSTVGISSHFIYKIRVLRYKRLLEIGDFGLNEEVALRRFSYNELKKATNGFKQELGKGSFGAVYKGALYRGKSRRVIAVKRLEKLVEEGEREFQAELRAIGKTHHKNLVRLLGFCVDGPKRLLVYEYMSNGSLGNLLFGDVITRPSWDDRARIALDIARGILYLHEECEAPIIHCDIKPPNILMDEFWIAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWQRNTPITVKADVYSYGIVLLETVCCRRNIEVNNISQPEEILLSGWAYQCFVAGELHKLVHWETVEKNVLENMVKVALWCIQDEPVLRPSMKSVVMMLEGITEVAIPPCPTTNSM*	808

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod08g1951	807	ProSiteProfiles	Protein kinase domain profile.	519	793	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod08g1951	807	PIRSF	SRK	9	807	IPR024171	GO:0004674
	Dod08g1951	807	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	26	805	IPR045874	GO:0004672
	Dod08g1951	807	Gene3D	-	153	288	IPR036426	-
	Dod08g1951	807	SUPERFAMILY	Protein kinase-like (PK-like)	505	791	IPR011009	-
	Dod08g1951	807	Pfam	Protein kinase domain	522	787	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod08g1951	807	ProSitePatterns	Protein kinases ATP-binding region signature.	525	550	IPR017441	GO:0005524
	Dod08g1951	807	SMART	blect_4	40	153	IPR001480	-
	Dod08g1951	807	Pfam	D-mannose binding lectin	80	163	IPR001480	-
	Dod08g1951	807	ProSiteProfiles	Bulb-type lectin domain profile.	34	151	IPR001480	-
	Dod08g1951	807	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	642	654	IPR008271	GO:0004672\|GO:0006468
	Dod08g1951	807	SUPERFAMILY	alpha-D-mannose-specific plant lectins	80	199	IPR036426	-
	Dod08g1951	807	Gene3D	-	30	152	IPR036426	-
	Dod08g1951	807	Gene3D	Phosphorylase Kinase; domain 1	499	597	-	-
	Dod08g1951	807	Pfam	S-locus glycoprotein domain	249	328	IPR000858	GO:0048544
	Dod08g1951	807	Gene3D	Transferase(Phosphotransferase) domain 1	598	797	-	-
	Dod08g1951	807	Coils	Coil	549	569	-	-
	Dod08g1951	807	SMART	serkin_6	519	790	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod08g1951	807	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1	26	805	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod08g1951	Dod-Chr8	46341537	46344082	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod08g1951	508	800	Receptor kinase-like Gene Family	AT5G20050	41.214	3.20e-65	223

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Dod08g1951		Pkinase	3.5e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod08g1951	-		-	ahf:112707609	1001.89