Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1938 ATGTCAATGGATAAAGATTTGTACAGTGCTCCACTGAATATGGCTGGTCCTAGTTCTACTGTCGTAGATGAAATTACGCCAAAGCCACTTCTTCATTGCTATTCATTTGACCTTAATAACCAAAACCATATCATAAACGGGATTCCAATGCTTGCTGGAGAGCAAGTTGAACCTATAAGCAATGTGCATGTAGGTGGTAGCTTCATCAATTCTGCAAGTATTGCTGCCAGTGATTCATTTGTTACATCACAACAAGGAAAGAATATTGTTGGAGATGCCTCAAACCACATTCAAAACAGTGAGTTTCATGAGCATTTAGCTGGAGGAACACCAAGTACTCCTGCATCACTTGCAGCCATTCTTGCTGCTAGAATTGGCCTTCAAGAAAATATAGAGAATTCGGCAACTTTGTCTCCTTCACTCTCTTCATTTGAGGCACTAGGATCATATGTCTTCAATAATTGGCAAGATACTTCAAACCCTTTGTCCTCAACTTTTGGTGATCGCGGCGGCTATGATGAAGTGCCCGGCAATGGTAAGTGGAATGTCAACAAGTTTCTGAAAGCTCCAGAGGTTGATGGATCTGGATTCCTACCATATTCGTCCATAGGAAACCTTGATCCTAATGGATGGACAACATTGAATGTTGCAAACTTGACTAATCATGCTTACAATTCCTCTAATTATAGTAATGAGCTATCATTAAGTCTGGCAACATCGCCAACCACCGGTCAGTGCTCGGAGATGAGCGGCTCTGATGTGAGTTGTAGCATGAATGAAACAAGGACAGGCTTGGAGAAAGCCTCTTGTAGCAGTAGGGAACTGTCTATGAGTTTAGGTTCTGATAAACATGTCCAGTTTTCACCAACAATACTGGGATCAAAATACCTTGTAGGAATTCAAGAGATACTTGCTCAAATTGCATCTTATTCATTTGACAATCTAGAAGAGGTAAATTATTCAGCTGCTGGTCCTAGAGTAGGAGGAAATAAATCAGCTTCAGCCTTCACATCCAAGAGAAGGATAGTGACAAATCAAAGCGCAAATTCTATGTTTGAAGGTCATGCAGAATCTCCAGTGCAAAGACATGCTGCTGAATCAAACAAACCTCAATTGCTGACACTTCTACAGCTGGTGGACGATCGATATAGTCAGTGTTTGGATGAGATTCACACTGTTGTATCTGCATTCCATGCTGCTACCGAGCTGGATCCACACCTACACGCACATTTTGCGCTTCGAACGATTTCTCTCCTATACAAGGACTTGCGAGAGAGGATTAGCAATCATATTCTTGCCATGGGGTCTAATTTTAACGACTCGCTGTTCAGATGA 1335 0.4172 MSMDKDLYSAPLNMAGPSSTVVDEITPKPLLHCYSFDLNNQNHIINGIPMLAGEQVEPISNVHVGGSFINSASIAASDSFVTSQQGKNIVGDASNHIQNSEFHEHLAGGTPSTPASLAAILAARIGLQENIENSATLSPSLSSFEALGSYVFNNWQDTSNPLSSTFGDRGGYDEVPGNGKWNVNKFLKAPEVDGSGFLPYSSIGNLDPNGWTTLNVANLTNHAYNSSNYSNELSLSLATSPTTGQCSEMSGSDVSCSMNETRTGLEKASCSSRELSMSLGSDKHVQFSPTILGSKYLVGIQEILAQIASYSFDNLEEVNYSAAGPRVGGNKSASAFTSKRRIVTNQSANSMFEGHAESPVQRHAAESNKPQLLTLLQLVDDRYSQCLDEIHTVVSAFHAATELDPHLHAHFALRTISLLYKDLRERISNHILAMGSNFNDSLFR* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1938 444 SMART prehox3 285 429 IPR006563 -
Dod08g1938 444 Pfam Associated with HOX 291 428 IPR006563 -
Dod08g1938 444 PANTHER HOMEOBOX PROTEIN ATH1 18 440 - -
Dod08g1938 444 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 18 440 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1938 226 436 Homeobox Transcription Factor Family AT4G32980 50.233 4.02e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1938 - - gmx:100812648 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1938 08 46199680 46202546 Dod08g1938 08 46199680 46202546 ECH