Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1935 ATGATGGAAAGAAAATGTTCATATTGTGGAAACTTTGGTCACAATTCAAGGACTTGCAATAGTCACATAGATGGTATCACTGGTGGAAGACTAAAGCTATTTGGGGTGCAGCTTGACCTTTGTTGTTCTTCTTCATCAGCATCAGCATCTTCTTCTTCTACTTCACCTACACAATTTGCCATGAAAAGAAGTTTCAGCTTGGACTACTTGCTATCTTCATCCTCCTCCTCACCTTTTGAGCTTGGCACAGATGAAAACTCAGATAAAACTAGTTATAGAAGTTACTTAGCCAGTAGCAGTGGCCTCAACTCAACAACCCAACAGAGGAAAAAAGGTGTGCCATGGAGTGAGGAAGAGCACCGAGCATTTCTTGCAGGGATTGAGAGGCTGGGGAAGGGTGATTGGAGAGGCATATCTAGAAGCTTTGTGACAACAAGAACACCATCCCAAGTGGCTAGTCATGCACAAAAATATTTTCTCCGTCAGAATAGCTTCAATAGAAGAAAGCGCCGTCCTAGCATCCTTGATGTGGGAAGAGGAGAAGCCACAATTGTTCAATTTAATCCATGTTTTAAGCAGCCAATTGATGAAGCTTCAGGTCAATTTGGGTGCCCATCGGGAACCACTGATTTGATTTCCGCTAGCTGCCACTTTCACGGCAATAAATTTTGTCTTCCTCATCTGTGGCTTTCTGATCATCATTCAGCGTTGAATTGCTCCATCTCTTCAACAAACTACGTAATTCAAAGCGCGGACGCCCCAGATTTAGATCTCAAACTTGCAGTTCCCAGCTGA 795 0.4327 MMERKCSYCGNFGHNSRTCNSHIDGITGGRLKLFGVQLDLCCSSSSASASSSSTSPTQFAMKRSFSLDYLLSSSSSSPFELGTDENSDKTSYRSYLASSSGLNSTTQQRKKGVPWSEEEHRAFLAGIERLGKGDWRGISRSFVTTRTPSQVASHAQKYFLRQNSFNRRKRRPSILDVGRGEATIVQFNPCFKQPIDEASGQFGCPSGTTDLISASCHFHGNKFCLPHLWLSDHHSALNCSISSTNYVIQSADAPDLDLKLAVPS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1935 264 ProSiteProfiles Myb-like domain profile. 107 159 IPR001005 -
Dod08g1935 264 CDD SANT 114 159 IPR001005 -
Dod08g1935 264 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 187 - -
Dod08g1935 264 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 110 162 IPR006447 GO:0003677
Dod08g1935 264 PANTHER TRANSCRIPTION FACTOR KUA1 2 187 - -
Dod08g1935 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 163 IPR017930 -
Dod08g1935 264 Gene3D - 113 165 - -
Dod08g1935 264 SUPERFAMILY Homeodomain-like 107 164 IPR009057 -
Dod08g1935 264 SMART sant 111 161 IPR001005 -
Dod08g1935 264 Pfam Myb-like DNA-binding domain 114 159 IPR001005 -
Dod08g1935 264 ProSiteProfiles SANT domain profile. 115 163 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1935 Dod-Chr8 46169082 46171541 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod08g1935 Myb_DNA-binding 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1935 - - gmx:100779256 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1935 08 46169082 46171541 Dod08g1935 08 46169082 46171541 ECH