Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1924 ATGCCCAAAATGAAGCACCTCCTCAGAAAGCTTCACATCGGTGGCGCCGCCGCCGCCGCAACCACCACCGCCATCAACCACCACCACCACCATAACCCAGTCATCGCTCAATCTACTTCCTCTGCTTCCTCTTCCGCTCTTCCCTCTCCCACTCCAATCGTCGCTGCTTCCGATCCATCATCAAATTCAAACCCTAACAACAACAACAACAGCAACAGTGAAAACGGCGTCGGCGATTTCGGATTGTTGGAGGAAGAGGAGTTTCAGATGCAATTGGCTCTCGCGATCAGCGCCTCCGATCCCGATGTGAGAAGGGACCCCGAATCGGCGCAGATCGATGCAGCGAAACAGATCAGCCTCGGTTACGAAGCTTCTCTCTCTGATACACAAGCACTCGTTCAGTTTCAATCCCTTCGTTATTGGAACTATAATGTCATTGGTTATGAAGAGAAAGTGATGGATGGATTTTATGATGTTCATGGCATAACCTCGAATCTTATTGAACGAGGAAAGATGCCATTGTTGGTGGATCTGCAAACTACACCTGTCTCAGGAAATGGTGATGTTGAAGTGATTTTGGTGAACCGCATAGTCGATGCTCAGCTGAAGCAGCTTGAAGACAAAGCCTGTGCTTTATTCAATGAGTGTAGTGTTTCTGAGCTAGGATTAGTTCTGAGTGGCTTAATTCAAAAACTTGCCAATATTGTTGTGAATAGAATGGGTGGTCCAGTTGGTAGTGCTGACAAAATCACAAAAAGTTGGGCTATGAGGAGTCGTGAGCTTCGAGATTCTTTAAGAACCATTGTTCTCCCTCTTGGTTGTCTTGACATTGGACTTTCACGTCACCGAGCCCTACTTTTTAAGGTACTAGCTGATAGGATTAATATTCCCTGCATGCTGGTCAAAGGTAGCTATTACACAGGAACTGATGATGGGGCTGTGAATTTAATTAAAGCTGATGACGGGAGTGAGTACATTATTGATATGATGGGTGCTCCCGGCACTCTTATTCCTGCTGAGGTACCCAGTAGTCAGCTCCAAAACTACAGCTTTGCCATTGGGGGTTGTGCAGAGATTGTAGGAGTACCTAACAACACACTTTCAATACTTGATGATGGCACTGGTGTGCTGGGAATCTCATCTGATCTTGGTAGGATTTCAACACTGGGGAAAGTCCAGCCAGAAGAATTATTAGATATGGGCAGTCAAATAAAACCAGATCAAATACATCATGTTGAAGTAGATGAAACAGAGAACTTCAAACATACAGAAGCATATGAATGCTCATCGCCTGCAGAAAAGATGCGTGTAAATAATGTCTCCAAGTATGTCCTGAGTGCAGCAAAGAACCCAGAATTTGCTCAAAAACTGCACACGGTTCTATTAGAGAGCGGTGCATTACCTCCTCCTGATCTTTTTTCAGATATAAATCCTCGAGATACGGGAGTGGGTAAAGTCAATGAAAAAATTGTTGTTGATTCTATTCAAGCAGACCCACACGAGTTGCTATTAAGCTATGAGAAGTGTCTCATACCCTCTCAAGGGGTAGGCTGTGCCAGTAACACTAGGTTATGTCTGTCTGCTGGCCGGTTAGCTGAACAGCAAAAAGAATTGCATACAGATGCTATTGGATTTTATAACTCTTTGCAGAGTGATAATACAAGGGAGGGGTCTGTAGCTGCTTTTGATAGAGTTAATGATTTAGAGCTATCTAAGTCATTAATTGTTGATTCGGTTGCTATCACCCCACATAAGATTTGTAAAGAAAAATATATTGAACCTTCCATGCCCAAGGCAGCTGTTTCTTGCAAAAGAGATAATGCGATTGACTGTTTTCATGATGATGATGAAAATAGTGTTACAAATATGGTTGAATCGTCTTTTAATAACATTGAATCAGGGAAAGATTCAGCCATTCAAATAAATGAGAAGGTCAATGGAGATTATACCCTACATGATGGTAAAGGCAAGAAAGTTAACCCAGTACTTGGTGAAGGGTCAGAATGGGAAATTCAATGGGAGGATCTATGTATTGGTGAGCGTATTGGTATTGGTTCTTATGGTGAAGTTTACCGTGCTGATCACAATGGCACTGAAGTTGCCGTGAAGAAGTTTCTAGACCAAGATTTCTCTGGTGATGCACTAGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGGCTGCGGCATCCTAATGTTCTTCTTTTCATGGGAGCGATTACTAGCCCCCCACATTTCTCTATCTTAACAGAGTTTCTTCCAAGAGGCAGTTTATATAGGCTACTGCATCGTCCCAATGTTCGAATTGACGAGAAGAGGCGATTGCGTATGGCTCTTGATGTGGCTAAGGGAATGAATTACTTGCATACGAGCAATCCCCCCATTGTCCATCGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGCACTGGGTCGTTAAGGTCTGTGATTTTGGTCTGTCACGGATGAAGCACCATACCTTTTTGTCATCAAAGTCTTGTGCTGGAACGCCTGAGTGGATGGCACCCGAAGTCCTAAGAAATGAGCCAGCGAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATCTTGTGGGAGTTGGCCACCATGACAATCCCCTGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTTCAAAATAAACGGCTTGAAATTCCAGATGATGTCGATCCTGAAGTAGCACAAATAATACACGATTGCTGGCAAATGGAGCCGCACTTGCGGCCATCATTCGCGCAACTGATGAATCGTCTTTCCCGTCTTCAACACCTGGTTGTCGAAAAAACGAGCTCAACAAACTAA 2832 0.4371 MPKMKHLLRKLHIGGAAAAATTTAINHHHHHNPVIAQSTSSASSSALPSPTPIVAASDPSSNSNPNNNNNSNSENGVGDFGLLEEEEFQMQLALAISASDPDVRRDPESAQIDAAKQISLGYEASLSDTQALVQFQSLRYWNYNVIGYEEKVMDGFYDVHGITSNLIERGKMPLLVDLQTTPVSGNGDVEVILVNRIVDAQLKQLEDKACALFNECSVSELGLVLSGLIQKLANIVVNRMGGPVGSADKITKSWAMRSRELRDSLRTIVLPLGCLDIGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGTLIPAEVPSSQLQNYSFAIGGCAEIVGVPNNTLSILDDGTGVLGISSDLGRISTLGKVQPEELLDMGSQIKPDQIHHVEVDETENFKHTEAYECSSPAEKMRVNNVSKYVLSAAKNPEFAQKLHTVLLESGALPPPDLFSDINPRDTGVGKVNEKIVVDSIQADPHELLLSYEKCLIPSQGVGCASNTRLCLSAGRLAEQQKELHTDAIGFYNSLQSDNTREGSVAAFDRVNDLELSKSLIVDSVAITPHKICKEKYIEPSMPKAAVSCKRDNAIDCFHDDDENSVTNMVESSFNNIESGKDSAIQINEKVNGDYTLHDGKGKKVNPVLGEGSEWEIQWEDLCIGERIGIGSYGEVYRADHNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVLLFMGAITSPPHFSILTEFLPRGSLYRLLHRPNVRIDEKRRLRMALDVAKGMNYLHTSNPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATMTIPWKGLNPMQVVGAVGFQNKRLEIPDDVDPEVAQIIHDCWQMEPHLRPSFAQLMNRLSRLQHLVVEKTSSTN* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1924 943 MobiDBLite consensus disorder prediction 36 77 - -
Dod08g1924 943 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 73 940 - -
Dod08g1924 943 PRINTS Tyrosine kinase catalytic domain signature 750 763 IPR001245 GO:0004672|GO:0006468
Dod08g1924 943 PRINTS Tyrosine kinase catalytic domain signature 789 807 IPR001245 GO:0004672|GO:0006468
Dod08g1924 943 PRINTS Tyrosine kinase catalytic domain signature 899 921 IPR001245 GO:0004672|GO:0006468
Dod08g1924 943 PRINTS Tyrosine kinase catalytic domain signature 855 877 IPR001245 GO:0004672|GO:0006468
Dod08g1924 943 PRINTS Tyrosine kinase catalytic domain signature 836 846 IPR001245 GO:0004672|GO:0006468
Dod08g1924 943 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Dod08g1924 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Dod08g1924 943 Gene3D Phosphorylase Kinase; domain 1 669 753 - -
Dod08g1924 943 MobiDBLite consensus disorder prediction 36 78 - -
Dod08g1924 943 CDD STKc_MAP3K-like 682 928 - -
Dod08g1924 943 ProSiteProfiles Protein kinase domain profile. 676 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1924 943 PANTHER SERINE-THREONINE PROTEIN KINASE 73 940 - -
Dod08g1924 943 Pfam Ethylene-responsive protein kinase Le-CTR1 134 337 - -
Dod08g1924 943 SMART serkin_6 676 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1924 943 Gene3D Transferase(Phosphotransferase) domain 1 755 941 - -
Dod08g1924 943 Pfam Protein tyrosine and serine/threonine kinase 678 928 IPR001245 GO:0004672|GO:0006468
Dod08g1924 943 SUPERFAMILY Protein kinase-like (PK-like) 666 928 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1924 Dod-Chr8 45890467 45902418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1924 624 943 MAP Kinase Kinase Kinase AT5G11850 75.776 2.24e-173 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dod08g1924 PK_Tyr_Ser-Thr 9.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1924 K04424 - gmx:100779137 1360.13