Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1917 ATGAAAGCCAAAAGGAACAATTCATTAATGAGGTGGTCATTCTATCCCAAATCAATCCACAGGAACGTAGTGAAACTTTTAGGTTGTTGTTTAGAGGAAGAAGTCCCTATACTAGTATATGAATTTGTTAACAATGGCACCCTCTTTGATTTGATCCACAATGAAAGCAAGGCAAATAATTTAACCTGGAAAACCTGTCTAAGAATAGCAATAGAGGCAGCAGAAGCTCTATCATATCTGCATGCAGCTGCTTCCTCACCCATTGTGCACAGAGATGTCAAGAGTGCTAACATTCTCTTGGATGACACTTACACTGCCAAAGTGTCAGATTTTGGAGCTTCAAGATTGGTTCCACTAGATAAAATTGCATTAGGCACAAGGGTGCAGGGAACTTTTGGATACTTGGACCCAGAGTATATGCAAACAAGCCAACTAACTGAGAAAAGTGATGTCTATAGCTTTGGGGTTGTGCTACTAGAGCTTCTAACAGGTGAGAAACCTTTTGATGCTAACAGGTCAGAAGAGAAAAGAAGTACTGCTAACTACTTTCTATCTTGCTTGAAAGATGATCGCTTGTTTGACGTTGTTCAAGTTGATATCATGAATGAAGAAAACAAGGAGGAAATCAAGGAGGTTGCTATTCTTGCATCAAGGTGCTTGAGGCTTAAAGGGGAAGAAAGACCTAGCATGAAGGAAGTGGGAATGGAATTGGAGGGAATAAGGCTAATGCAAAAGCATCTTTGGATGAATCCAAAAAATAATTTGGAAGAAACTCAATACTTGCTTCCTGAGTCATCATTTGAAATATATAAAGATGGTGAAAGCAGTAGCTATCAGAATGTTGTGAATGACAGCATCAGGGATCAGGTACTTATTGCCTTCGATGATGGAAGATGA 897 0.3935 MKAKRNNSLMRWSFYPKSIHRNVVKLLGCCLEEEVPILVYEFVNNGTLFDLIHNESKANNLTWKTCLRIAIEAAEALSYLHAAASSPIVHRDVKSANILLDDTYTAKVSDFGASRLVPLDKIALGTRVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLLELLTGEKPFDANRSEEKRSTANYFLSCLKDDRLFDVVQVDIMNEENKEEIKEVAILASRCLRLKGEERPSMKEVGMELEGIRLMQKHLWMNPKNNLEETQYLLPESSFEIYKDGESSSYQNVVNDSIRDQVLIAFDDGR* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1917 298 Gene3D Transferase(Phosphotransferase) domain 1 47 260 - -
Dod08g1917 298 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1917 298 Gene3D Phosphorylase Kinase; domain 1 3 46 - -
Dod08g1917 298 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 19 274 - -
Dod08g1917 298 SMART serkin_6 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1917 298 SUPERFAMILY Protein kinase-like (PK-like) 20 246 IPR011009 -
Dod08g1917 298 Pfam Protein kinase domain 17 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1917 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
Dod08g1917 298 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 274 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1917 Dod-Chr8 45797058 45797954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1917 20 298 Receptor kinase-like Gene Family AT1G21240 51.429 1.57e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dod08g1917 Pkinase 3.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1917 - - gsj:114381577 412.535