Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1916 ATGAGATCTGAGGGCAGATGGTGTGGGGTGGTGGTGGTAGGGATGGCGGTTCTGGGGAGGGAGTGGTGTGGACCTGGTTTTAGGAAAGGGATGGTTTGGCTCAACCGCAATTTAGTCCTCCTGGTAGGAGCAGCTGCAGATGATCAAATTCAGACCCTTGATGGCTGCCAAAGTGCTTGTGGAGATGTTCACATTCCATATCCATTTGGGGTAGGAAATTCATCCACAACCCACGAAAAATGTTTCTTGGAAGAAGCATTTGAGCTTACTTGCAACAAAATCAGCAACACTTTATTATGGGGTAATGTCCCAGTCACAGCCATGAACATCACCCAAGGTAAAGCGGACATGATGCTTTTTGTCTCCAAAGTTTGTTACAATAGTAAATATGGTAGCAAAAAGACCACAGGTAATAGATCCAGGCTCAAAATTAATGCTCCTGGTTTTACCATTTCTAGCGACGATAACAAGTTCATAAGTGTTGGTTGTGACACTTTTGGCTACCTTAATAGCTATTACAACAACACGGAATATTCAACTGGGTGCTTAACAAGATGTTATTACAATAGCATGGAGATTGTAGATGGGGATTGCTCAGGGATTGGGTGTTGTCAGGTGGATGTTCCTGCTGGAATGAGGAACATCTCTGTACAAACATCTAGCTTTGAGAATTTCAACAGGTCCTTGGGCTTCAACAATTGCAGCTATTCCTTTGTTGCCAAGAATGGGGAATATAACTTCTCCAAGAGTCACTTGGAATATCTTCCTGATGAGAAGATCCCTGTGGTCTTTGATTGGACTGTTGGAGGAAGTGAGACATGTGAAGATTCTGAGAGCAGAGGCACCAATGCCTGCAAGGGAAATACCAGTTCTGTGAACGCAGATACTGGATATGGTTACCAATGCCACTGCAAGAATGGCTATCAAGGAAACCCGTACCATCCCAATGGCTGCACAGACATTGATGAATGCAAGACTGGAAATAATACATGCGTAAGTGTATATAATTGTCGCAATACACTTGGGTCCTACGAATGCTTTTGTCCTAAGGGGCAATCCGGAACTGGAACAATGGATCAACCGTGCCACAAAGAAAATGCACTTCCGAAGTATGTCATTGGTGCAGGCACAGGATTTATTACTCTTTCTGTGGCAATTTCATTGCTATTGTTGACGTATCATAAAAGAAAACTAATCAAATTGAAAGAACAGTTCTTTAAACAAAATGGCGGCTTTATTTTGTTGCAACAACTGTCTACAAGAGAAGAGTCCTCCCAAACTGCTCAAATTTTCACAGCAGATGAATTGAAGAAGGCTACTAACAACTATGATGAGAACTTAATCATTGGCAAAGGAGGCTATGGTATAGTTTTCAAAGGATTTCTAGCAGATAATAGGGTTGTTGCTATCAAGAAGTCTAAAATAGTTGATGAAAGCCAAATTGAGCAATTCATTAACGAGGTGGTTGTCCTATCCCAAATCAATCACAGAAATGTAGTGAAACTTTTAGGCTGTTGTTTGGAGACTGAAGTTCCATTACTAGTTTATGAATTTGTTAACAATGGAACCCTTTTTGAATTTATTCACAAGGGAAGAAAGGTAAATAATTCAAATTGGAAAACCCGTCTAAGGATAGCAGTAGAGGCAGCAGGAGCTCTATCATATCTTCACTCAGCTGCCTCTATTCCCATTATTCATAGAGATGTCAAAAGTGCCAATATTCTCTTAGATGAAACTCACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCATTAGATCAAACCGCATTAGCCACAATGGTGCAAGGCACGTTTGGATACTTGGATCCAGAGTACATGCAAACAAGCCAACTTACTGATAAAAGTGATGTTTATAGCTTTGGGGTAGTGCTAGCAGAGCTTCTAACAGGTGAGAAACCTCTTTCTTTTGACAGGTCAGAAGATAATAGAAGTCTTGCTATCTACTTTTTATCTTGCTGGAAAGAGGATCGCTTGTATGACGTTCTTGAAGTAGGCCTTTTGAATGAAGAAAATAAGCAAGAGATCGAGGAGGTTGCCATTCTTGCAACAAAGTGCTTGAGACTTAAAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCAATGGAATTGGAAGGAATAAGGTTGATGCAAAAGCACCTTTGGATCAATGCAGATAAAAATCTAGAAGAGACTCAATCCTTGCTTCCTAAGTCATCATCCAAAATATATGAACATGGTGATAGCAGTAAGCACCAAAATACTGGCTATGATAGCAGCATTAAGGACCAAGTACTAATTGCCTTTGATGATGGAAGATGA 2328 0.4089 MRSEGRWCGVVVVGMAVLGREWCGPGFRKGMVWLNRNLVLLVGAAADDQIQTLDGCQSACGDVHIPYPFGVGNSSTTHEKCFLEEAFELTCNKISNTLLWGNVPVTAMNITQGKADMMLFVSKVCYNSKYGSKKTTGNRSRLKINAPGFTISSDDNKFISVGCDTFGYLNSYYNNTEYSTGCLTRCYYNSMEIVDGDCSGIGCCQVDVPAGMRNISVQTSSFENFNRSLGFNNCSYSFVAKNGEYNFSKSHLEYLPDEKIPVVFDWTVGGSETCEDSESRGTNACKGNTSSVNADTGYGYQCHCKNGYQGNPYHPNGCTDIDECKTGNNTCVSVYNCRNTLGSYECFCPKGQSGTGTMDQPCHKENALPKYVIGAGTGFITLSVAISLLLLTYHKRKLIKLKEQFFKQNGGFILLQQLSTREESSQTAQIFTADELKKATNNYDENLIIGKGGYGIVFKGFLADNRVVAIKKSKIVDESQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFEFIHKGRKVNNSNWKTRLRIAVEAAGALSYLHSAASIPIIHRDVKSANILLDETHTAKVSDFGASRLVPLDQTALATMVQGTFGYLDPEYMQTSQLTDKSDVYSFGVVLAELLTGEKPLSFDRSEDNRSLAIYFLSCWKEDRLYDVLEVGLLNEENKQEIEEVAILATKCLRLKGEERPSMKEVAMELEGIRLMQKHLWINADKNLEETQSLLPKSSSKIYEHGDSSKHQNTGYDSSIKDQVLIAFDDGR* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1916 775 SMART serkin_6 443 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1916 775 ProSiteProfiles EGF-like domain profile. 320 358 IPR000742 -
Dod08g1916 775 ProSiteProfiles Protein kinase domain profile. 443 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1916 775 Gene3D Transferase(Phosphotransferase) domain 1 519 737 - -
Dod08g1916 775 CDD EGF_CA 320 355 - -
Dod08g1916 775 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 337 348 IPR000152 -
Dod08g1916 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Dod08g1916 775 SUPERFAMILY Protein kinase-like (PK-like) 422 714 IPR011009 -
Dod08g1916 775 Gene3D Laminin 271 362 - -
Dod08g1916 775 Pfam Wall-associated receptor kinase galacturonan-binding 56 112 IPR025287 GO:0030247
Dod08g1916 775 SMART egfca_6 320 363 IPR001881 GO:0005509
Dod08g1916 775 Pfam Calcium-binding EGF domain 320 362 IPR001881 GO:0005509
Dod08g1916 775 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 744 IPR045274 GO:0007166
Dod08g1916 775 SUPERFAMILY EGF/Laminin 320 355 - -
Dod08g1916 775 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 33 744 - -
Dod08g1916 775 CDD STKc_IRAK 449 716 - -
Dod08g1916 775 Gene3D Phosphorylase Kinase; domain 1 415 518 - -
Dod08g1916 775 ProSitePatterns Protein kinases ATP-binding region signature. 449 472 IPR017441 GO:0005524
Dod08g1916 775 Pfam Protein kinase domain 445 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1916 775 ProSitePatterns Calcium-binding EGF-like domain signature. 320 346 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1916 Dod-Chr8 45776518 45783519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1916 51 775 Receptor kinase-like Gene Family AT1G21230 45.270 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dod08g1916 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1916 - - adu:107495457 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1916 08 45776518 45783519 Dod08g1916 08 45776518 45783519 ECH