Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1915 ATGGAGCCAAAGGCCATGGTGGTGCTAATCGCTGCATTAGTGCTCCTTGTAGGGGGAGATGATCACATTCAAACCCTTGATGGCTGCCAAAGTGCTTGTGGAGGTGTTCCAATTCCATATCCTTTTGGAGTTGGAAATTCATCCGCAACCCGTGAGACATGTTTCTTGAAAGATACATTTAAACTTACTTGCGTCAACAACACTTTATACTGGGGAAAAAATTTACAAGTCACAGCCATAAACATCACCCAGGCCAAAGTGGAGATGATGTTTTTTGTCTCCAAAATTTGTTACAATAGTAGTTATGGTAGCAACCAGAGCTGGGGTAATCGTCCGTTTCTCACAGTTTACGCTCCTGGTTTTACCATTTCTAGCGATGATAACAAGTTCGTTAGTGTTGGCTGCGACACTTATGGCTATCTTAATAGCTTCTACGATGGTGCAGAATATGCAACGGGGTGCTTGACAAGATGTTACAACAGCACCAAGATTGTTGATGAGAAGTGTTCAGGGATCGGGTGTTGTCATGTGGATATTCCTCCAGGAATGAGGAACATCACTTTAAGGACATTTACCTATCAGAATTTCAATAGGTCTTTGAGCTTCAACAACTGCAGCTACTCCTTTGTTGCCAAAAATGGCAACTACACTTTTTCTAAGAGGCACTTAGAAAATCTACCTTTTGAGAGGATGCCTGTGGTCCTTGACTGGACAGTTGGAAATGAAACATGTGAACATTCTCGGGACAGAGGCACCAGTGCTTGCAAGGGAAATAGCACTTGTTTGAATGCTGGATATGGTTACCGATGCCAGTGCAAGAAAGGCTATGAAGGAAATCCATACCATCGCGACGGATGCATAGACATTGACGAATGTAAGACCGGAAATCATACATGCATAAGTGACCATAATTGTCGCAATACAGTAGGGTCCTATGAATGTTTTTGTCCTAAGGGGCAATCCGGAAATGGAACAAAGGAAAATGGGTGCAACAAGAGAAATGTATCTCTCAATCTTGTCATTGGTGGAAGCACAGGATTTATCCTTCTTTTTGTGGCGACTTCATTGTTTTTTTTTATGTACCAAAAAAGAAAACTCATCAAACAAAAGGAGAAATTCTTTAGGAAAAATGGCGGCCTCATTTTGTTGCAACAGCTACAACAACTCTCTGCTGGAGAAGAGTCCGCCCACATTGCTCAAATTTTCACAGCAACTGAACTAAAGAAGGCCACCAACAACTATGATGAGAAATTAATCGTTGGCAGAGGGGGTTATGGTACAGTTTTCAAAGGTTTTCTTGCTGATACTAGAATTGTTGCTATCAAGAAGTCCAAAATAGTTGATCAAAGCCAAAATGAGCAATTCATTAACGAGGTGGTTGTTCTATCCCAAATCAATCATAGAAATGTAGTGAAACTTTTAGGTTGTTGTTTAGAGGAAGAAGTTCCTATACTAGTTTATGAATTTGTAAACAATGGCACCCTCTTTGATTTTATCCATAATGAAGGAAAGGACAAATAA 1521 0.4057 MEPKAMVVLIAALVLLVGGDDHIQTLDGCQSACGGVPIPYPFGVGNSSATRETCFLKDTFKLTCVNNTLYWGKNLQVTAINITQAKVEMMFFVSKICYNSSYGSNQSWGNRPFLTVYAPGFTISSDDNKFVSVGCDTYGYLNSFYDGAEYATGCLTRCYNSTKIVDEKCSGIGCCHVDIPPGMRNITLRTFTYQNFNRSLSFNNCSYSFVAKNGNYTFSKRHLENLPFERMPVVLDWTVGNETCEHSRDRGTSACKGNSTCLNAGYGYRCQCKKGYEGNPYHRDGCIDIDECKTGNHTCISDHNCRNTVGSYECFCPKGQSGNGTKENGCNKRNVSLNLVIGGSTGFILLFVATSLFFFMYQKRKLIKQKEKFFRKNGGLILLQQLQQLSAGEESAHIAQIFTATELKKATNNYDEKLIVGRGGYGTVFKGFLADTRIVAIKKSKIVDQSQNEQFINEVVVLSQINHRNVVKLLGCCLEEEVPILVYEFVNNGTLFDFIHNEGKDK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1915 506 Pfam Protein tyrosine and serine/threonine kinase 420 502 IPR001245 GO:0004672|GO:0006468
Dod08g1915 506 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 305 316 IPR000152 -
Dod08g1915 506 Gene3D Phosphorylase Kinase; domain 1 381 489 - -
Dod08g1915 506 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 23 503 - -
Dod08g1915 506 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 261 272 IPR000152 -
Dod08g1915 506 ProSitePatterns Calcium-binding EGF-like domain signature. 288 314 IPR018097 GO:0005509
Dod08g1915 506 CDD EGF 255 281 - -
Dod08g1915 506 ProSiteProfiles EGF-like domain profile. 288 326 IPR000742 -
Dod08g1915 506 SUPERFAMILY EGF/Laminin 282 321 - -
Dod08g1915 506 Pfam Wall-associated receptor kinase galacturonan-binding 29 87 IPR025287 GO:0030247
Dod08g1915 506 Gene3D Laminin 241 290 - -
Dod08g1915 506 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 503 IPR045274 GO:0007166
Dod08g1915 506 ProSiteProfiles EGF-like domain profile. 247 287 IPR000742 -
Dod08g1915 506 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Dod08g1915 506 CDD EGF_CA 288 322 - -
Dod08g1915 506 SMART egf_5 243 287 IPR000742 -
Dod08g1915 506 SMART egf_5 291 331 IPR000742 -
Dod08g1915 506 Pfam Calcium-binding EGF domain 288 330 IPR001881 GO:0005509
Dod08g1915 506 Pfam Calcium-binding EGF domain 251 279 IPR001881 GO:0005509
Dod08g1915 506 SUPERFAMILY Protein kinase-like (PK-like) 394 503 IPR011009 -
Dod08g1915 506 Gene3D Laminin 291 330 - -
Dod08g1915 506 ProSiteProfiles Protein kinase domain profile. 414 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1915 506 SMART egfca_6 244 287 IPR001881 GO:0005509
Dod08g1915 506 SMART egfca_6 288 331 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1915 Dod-Chr8 45761957 45767267 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1915 24 500 Receptor kinase-like Gene Family AT1G21230 40.000 2.31e-109 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dod08g1915 PK_Tyr_Ser-Thr 9.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1915 - - adu:107495457 664.455