Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1913 ATGAATATTGCCGATGGGCATTGTTCAGGGATTGGCTGTTGTCAAGTGGATATTCCTCTCGGGATGAGGAACATCGCTATACAAACAAATAGCTATGAGAATTTCAATAGGTCTTTGAGCTTCAACAACTGCAGCTACTCCTTCGTTGCCAAAAATGGCAACTACACTTTTTCTAAGAGGCACTTAGAAAATCTACCTTTTCAGAGGATCCCGGTGGTCTTTGACTGGACAGTTGGAAATGAAAAATGTGAACAATCTAGGGATAGAGGCATCAATGCTTGCAGGGGAAACAGCACTTGTTTGGACTCTCATGCTGGATATGGTTACCGATGCCGATGCAAGAAAGGCTATGAAGGAAATCCATACCATCCCGAGGGATGCATAGACATTGACGAATGCAAGACCGGAAATCATACATGCACAAGTGATCATAATTGTCGCAATACAGTCGGGTCCTATGAATGTTTTTGTCCTAAGGGGCAATCCGGAAGTGGAACAAATGAAAATGGGTGCAACAAGAGAAACGTATCTCTCAATTTTGTCATTGGCGGAAGCACAGGATTTATCCTTCTTTTTGTGGCAACTTCATTGTTGTTTTTGATGTACCAAAAGAGAAAACTCATCAAACAAAAGGAGAAATTCTTTAGGAAAAATGGCGGCCTCATTTTGTTGCAACAGCTACAACAACTCTCTATAGGAGAAGAGTCAGCCCACGTTGCTCAAATTTTCACAGCTGCCGAACTAAAAAAGGCCACCAACAACTATGATGAGAAATTAATCATTGGCAAAGGGGGTTATGGTACAGTTTTCAAAGGTTTTCTTGCTGATACTAGAATTGTTGCTATCAAGAAGTCCAAAATAGTTGATCAAAGCCAAAATGAGCAATTCATTAACGAGGTGGTTGTTCTATCCCAAATCAATCATAGAAATGAAGTGAAACTTTTAGGTTGCTGTTTAGAGGAAGAAGTTCCTATACTAGTGTATGAATTTGTAAATAATGGCACCCTCTTTGATTTTATCCATAATGAAGGAAAGGAAAATAATTTAACTTGGAAAACTCGTCTAAGGATAGCAGTAGAGACAGCGGGAGCTCTATCATATCTGCACTCAGCTGCTTCTACACCCATTATCCATAGAGATGTCAAGAGCGCCAATATTCTCATTGAACAATATAATTTTGTAAGCCAACTTATGTCATCCTCTCTGTTACAAAAAATGGTGGCCTAA 1227 0.3969 MNIADGHCSGIGCCQVDIPLGMRNIAIQTNSYENFNRSLSFNNCSYSFVAKNGNYTFSKRHLENLPFQRIPVVFDWTVGNEKCEQSRDRGINACRGNSTCLDSHAGYGYRCRCKKGYEGNPYHPEGCIDIDECKTGNHTCTSDHNCRNTVGSYECFCPKGQSGSGTNENGCNKRNVSLNFVIGGSTGFILLFVATSLLFLMYQKRKLIKQKEKFFRKNGGLILLQQLQQLSIGEESAHVAQIFTAAELKKATNNYDEKLIIGKGGYGTVFKGFLADTRIVAIKKSKIVDQSQNEQFINEVVVLSQINHRNEVKLLGCCLEEEVPILVYEFVNNGTLFDFIHNEGKENNLTWKTRLRIAVETAGALSYLHSAASTPIIHRDVKSANILIEQYNFVSQLMSSSLLQKMVA* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1913 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Dod08g1913 408 Gene3D Transferase(Phosphotransferase) domain 1 331 399 - -
Dod08g1913 408 SMART serkin_6 255 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1913 408 SUPERFAMILY Protein kinase-like (PK-like) 235 390 IPR011009 -
Dod08g1913 408 ProSiteProfiles EGF-like domain profile. 86 125 IPR000742 -
Dod08g1913 408 Gene3D Phosphorylase Kinase; domain 1 222 330 - -
Dod08g1913 408 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 146 157 IPR000152 -
Dod08g1913 408 Gene3D Laminin 133 171 - -
Dod08g1913 408 Pfam Calcium-binding EGF domain 129 171 IPR001881 GO:0005509
Dod08g1913 408 ProSitePatterns Protein kinases ATP-binding region signature. 261 284 IPR017441 GO:0005524
Dod08g1913 408 Gene3D Laminin 80 132 - -
Dod08g1913 408 SMART egfca_6 129 172 IPR001881 GO:0005509
Dod08g1913 408 CDD EGF_CA 129 163 - -
Dod08g1913 408 SMART egf_5 82 128 IPR000742 -
Dod08g1913 408 SMART egf_5 132 172 IPR000742 -
Dod08g1913 408 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 390 IPR045274 GO:0007166
Dod08g1913 408 Pfam Protein kinase domain 256 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1913 408 ProSiteProfiles Protein kinase domain profile. 255 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1913 408 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 2 390 - -
Dod08g1913 408 SUPERFAMILY EGF/Laminin 124 163 - -
Dod08g1913 408 ProSiteProfiles EGF-like domain profile. 129 167 IPR000742 -
Dod08g1913 408 ProSitePatterns Calcium-binding EGF-like domain signature. 129 155 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1913 Dod-Chr8 45744631 45749654 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1913 8 390 Receptor kinase-like Gene Family AT1G21230 47.342 4.42e-121 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Dod08g1913 Pkinase 9.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1913 - - adu:107495457 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1913 08 45744631 45749654 Dod08g1913 08 45744631 45749654 ECH