Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1890 ATGGGTGCTTCAGGAAAATGGGTGAAAGCACTTATCGGCCTCAAGAAACCCGACAAGGATTACCACGGGAAGGAGGGTGGTGGGAAGAGCAACAAGAAGTGGATGAAGCTGTGGAGGAGTTCATCCGGGGACGTGGCTTCGTGGAAGGGATTCAAAGGAAGCCATGGAAGAGGAAGCAGAGCAGCTTCTGAGTGTGAAGAAGGGTCACATGATGCAAATGATGCTTTTACTGCTGCAGTAGCCACTGTGGTTCGAGCTCCACCCAAGGATTTTAGGCTCGTGAGGGAAGAATGGGCTGCAACTAGAATCCAAACTGCTTTCCGTGCCTTCTTGGCAAGAAGGGCCTTGAGGGCTTTGAAGGGATTGGTCAAGCTTCAAGCTCTGGTTCGGGGTAGACTGGTGAGGAAGCAGGCTGCAGTGACATTGAGGTGCATGCAGGCCCTGGTCCGTGTTCAAGCACGAGTCAGAGCTCGCCATGTTCGAATGTCCATTGAGGGGCAAGCAGTTCAGAACATGCTTAATGAAAGGCACAGCAAGGCAGATCTCTTGAAACGAGCAGAGGAAGGGTGGTGTGATAGCAAAGGAACGTTGAAAGATGTTAAAACAAAATTACAGATGAGGCAAGAAGGAGCATTCAAGAGAGAGAGAGCACTTGCATACTCTCTTGCTCAGAAGCAATGGAGATCAAACCCCATCTCAATATCAAAAGCAAAGGCCTCACTTTCCTCTCTCAATAACTATGAGGTAGACAAGGCTGATGGGGGGTGGAGTTGGTTGGAACGCTGGATGGCAGCTAAGCCATGGGAAAGTAGATTGATGGAACAAAACAATGCTGATCCCTCAGAAAAAACCCCTCCACCTCCAAAGAAATGTGTGAACTCAACAAATTCAAAAGCATCAGAACCATGCTTGGTCAAGGTGAGAAAGAACAATGTCACCACAAGGATTTCTGCTAGACAACCCCATATTGGTCAAGCTACTCGTTTTTCCTCAAGTCCGAGTTCTGAGTTTCGGTATGATGAGAGTTCTGCTTCATCTTCAATCTGCACATCTACAACACCAACATCTGGGAATGCTGCATTGGCTTGTGACAGGACAGATGACAGTAGTAGTAACACTATGGCAAGTTACATGAGCCTGACCGAGTCAACCAAGGCAAAGCAAAAAACTGGCAACCATCGTGTCAATAGAGCTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTGTCAAAAGGGGAGGCGTTTTATCTAATGGTGATTCCAAAAGCACTAATGGTTCTGATGCTTCAATCAACTATTCTAGGCCACTTTACCTACCCACCTACATGGATAAGAGCTCAGTGAAGCCATGCTGA 1356 0.4735 MGASGKWVKALIGLKKPDKDYHGKEGGGKSNKKWMKLWRSSSGDVASWKGFKGSHGRGSRAASECEEGSHDANDAFTAAVATVVRAPPKDFRLVREEWAATRIQTAFRAFLARRALRALKGLVKLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARHVRMSIEGQAVQNMLNERHSKADLLKRAEEGWCDSKGTLKDVKTKLQMRQEGAFKRERALAYSLAQKQWRSNPISISKAKASLSSLNNYEVDKADGGWSWLERWMAAKPWESRLMEQNNADPSEKTPPPPKKCVNSTNSKASEPCLVKVRKNNVTTRISARQPHIGQATRFSSSPSSEFRYDESSASSSICTSTTPTSGNAALACDRTDDSSSNTMASYMSLTESTKAKQKTGNHRVNRAQRQQSMDEFQFVKRGGVLSNGDSKSTNGSDASINYSRPLYLPTYMDKSSVKPC* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1890 451 MobiDBLite consensus disorder prediction 275 297 - -
Dod08g1890 451 SMART iq_5 95 117 IPR000048 GO:0005515
Dod08g1890 451 SMART iq_5 118 139 IPR000048 GO:0005515
Dod08g1890 451 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 450 - -
Dod08g1890 451 MobiDBLite consensus disorder prediction 316 435 - -
Dod08g1890 451 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Dod08g1890 451 MobiDBLite consensus disorder prediction 316 386 - -
Dod08g1890 451 MobiDBLite consensus disorder prediction 417 434 - -
Dod08g1890 451 PANTHER IQ-DOMAIN 5-RELATED 1 450 - -
Dod08g1890 451 Pfam IQ calmodulin-binding motif 123 137 IPR000048 GO:0005515
Dod08g1890 451 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Dod08g1890 451 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1890 Dod-Chr8 44994777 44998004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1890 1 445 IQD Protein Family AT2G26180 58.520 9.75e-146 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1890 - - gsj:114408830 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1890 08 44994777 44998004 Dod08g1890 08 44994777 44998004 ECH
Dod08g1890 08 44994777 44998004 Dod09g1965 09 41144997 41147304 PCT