Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1854 ATGAAACAAATAGTTCCCCAAAACACGAAAATCTCTAATGAAGCCAAGGAGATTATTAGGATCTGCGTGGTGGAGTTCATTGGATTTGTGACCAGTGAGGCCAACGAGCATTGCAAAAGGGAACAAAAAAGGATCATCGCGTCTGAGGACCTCAAGTGGGCCATGCAAGCCTTGGTTTCAATAGCTATGCTGAGCTTCTCAATGATTACCATCAGCAAACTCAAGACAACAATGCTGCAGTTGTTGAACGCATGGTTGGTCTTCCTCCCGTACCAACTCGCAGGAGGGTTGTAG 294 0.4592 MKQIVPQNTKISNEAKEIIRICVVEFIGFVTSEANEHCKREQKRIIASEDLKWAMQALVSIAMLSFSMITISKLKTTMLQLLNAWLVFLPYQLAGGL* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1854 97 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 58 IPR027113 GO:0001228|GO:0006355|GO:0016602
Dod08g1854 97 Gene3D Histone, subunit A 1 75 IPR009072 GO:0046982
Dod08g1854 97 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 55 IPR003958 -
Dod08g1854 97 SUPERFAMILY Histone-fold 1 58 IPR009072 GO:0046982
Dod08g1854 97 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1854 Dod-Chr8 43745278 43745571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1854 1 58 CCAAT-HAP3 Transcription Factor Family AT1G21970 53.448 1.86e-18 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Dod08g1854 CBFD_NFYB_HMF 1.5e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1854 K08065 - oeu:111407182 77.7962