Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1847 ATGGAGCAGTATAAGGGTGCTCCATTCGGTGAGCTTAGCCCACATGTTTTTGCTGTTGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGTCAATCTATCTTGGTCAGCGGTGAAAGTGGTGCTGGGAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGATGATAGAACAGTTGAACAACAATCCAATCCGCTTTTAGAGGCATTTGGTAATGCAAGGACTGTCAGGAATGACAATTCCAGCCGGTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCACGAGTAGTGCAGATAACGGATCCAGAAAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAGGGATGCAGAGACATATAAGTTAGGACATCCAAGTCACTTCCACTATTTAAATCAAAGTAAAATCTATGAACTTGATGGAGAAGCCATATTTCGTGTCTTAGCCGCAATTTTGCATTTGGGAAATATTGAATTTTCTCCTGGGAAAGAGCATGACTCATCTGTAATAAAGGATGACAAATCAAGGTTTCATATGCAGATGGCTGCTGATCTTTTCATGTGTGATGTAGACCTACTGCTAGCAGCATTGTGCACTCGTTCGATACAAACTCGAGAAGGAAGTATCATCAAAGCTCTTGATTGTAATGCTGCTGTCGCTGGCCGGGATGCTTTGGCAAAAACTGTTTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTTGGGCAAGATATCAATTCCAAGATTCAAATTGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAATAGCTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTATGGCAAAGAAGAAATAAACTGGAGTTACATAGAATTTGTGGACAATCAAGATGTGTTAGATTTGATTGAAAAGAAACCAATTGGTATCATTGCTCTTTTGGATGAAGCTTGCATGTTTCCAAAATCGACCCATGAAACATTCTCAACCAAGTTGTTTCAGAATTTCCGGTCTCACCCTAGGTTGGAAAAGGAAAAGTTTTCACAAACTGATTTTACCATTTCTCATTATGCTGGAAAGGTCACTTATCATACGGATACCTTTTTAGACAAAAACCGTGATTATGTTGTAGTAGAACACTGTAATCTATTATCTTCTTCAAAATGCCCCTTTGTGTCTGGTCTTTTTCCTTTGCTGCCAGAGGAATCTTCAAGATCATCGTATAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTCCAAGCACTTATGGAGACCCTTAAATCTACAGAGCCTCATTACATACGATGTGTGAAGCCAAATTCTTTGAACCGACCACAAAAGTTTGAGAATTCTAGTGTCATACACCAATTGCGATGTGGGGGTGTCCTTGAGGCTGTTCGCATAAGTCTGGCAGGTTACCCCACTCGAAGGACTTATTCAGAGTTTGTGGATCGCTTTGGATTAATAGCCCCTGAATTTATGGATGGAAGTTCTGATGATAAAGCTGCAACTGAGAAAATTCTGCAAAAGCTCAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGCATTTTGGACTCCAAACGTGCTGAAGTTTTGGACAATGCTGCCAGGTGTATTCAGCGCCGGTTGAGGACATTTATTTTACACAGGGATTTCATCACAGTAAGAGCCGCTGCAATTTCTCTCCAGGCATGCTGCAGGGGATGCATTGCTAGAAAGATTTATGTTGCTAAAAGGGAGACAGCTGCAACCATCTCCATTCAGAAATATATTCGTATGTGTCTAATGAGGCTTGCTTACTTAAAACTACATTCTTCTGCTATTATCATCCAATCCCATGTTCGTGGTTTCACAACTCGCACAAGATTCTTGCATGGAAAGGAGCATAAAGCTGCTACTATAATTCAGGCCTATTGGAGGATGTCCAAGGTTAGGTCAGCTTTCCAACAACATCAAGCTTCAATTGTGGCAATACAATGCCGTTGGCGGTGTAGACAAGCAAAAAGAGAGCTTCGTAGACTTAAGCAAGAAGCTAATGAAGCTGGTGCTCTCCGTTTAGCTAAGAGTAAACTTGAGAAGCAATTGGAAGAACTCACATGGCGTTTGCATCTTGAAAAGAAAATGAGGGGTTCTAATGAAGAGTCTAAGCAAATGGAGATCACCAAACTTAAAAAGATGTTAGAAGCTCTTAATCTTGAATTAGATGCAGCTAAATTGGCAACAATCAATGAGTGCAACAAGAATGCAGTTCTGCAAAATCAATTGGAATTGTCAATAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAGTTGCAATGGATGAAGTACGAAGGGAAAATGCTCTACTAAAGGGTTCTTTGGATGCTTTTGAAAAGAAGTACACAGCTTTGGAGCTTGAACTTATGAATGCTCGAAAAGGCCATAATGAAACCATTGAGAAACTGAGGGAGTTTGAACAAAAGTGTTCCCAACTCGAGCAAAATGTGAAAAGCCTTGAGGAAAAGATATTGAGTTTGGAGGATGAAAATCTTGTGCTTCGTCAGAAAGCCTTAAGTGCTCCTCCTAAGAATAACCGTTCAGGTTTTGCAAAGTCATTGTCAGAGAAATACTCAAGTGTTATAGCCTCTCGCACCGAGCGAAAGACCCTATTTGAGTCACCCACACCCACAAAACTTATTGTCCCTTTTACACATGGCTCGACAGACTCTCGTCGATCCAAGTTAACAGCAGAGAGGCACCAGGATAACTATGAATTTCTCTCTAGGTGTATCAAAGAAAATTTGGGATTTAAAAATGGTAAACCTCTGGCAGCTCGTATCATATACAAATGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGCACAGCCATTTTCGATTACATAATTGAAGGCATAAATGATGTGCTAAAGGTTAGGGACGATGACTCTGTCTTGCCATATTGGCTGTCCAATACCTCTGCGCTTCTGTGCCTCTTACAGAGGAACTTACGTTCAAATGGCTTTCTAACTACCAGTGCCCAACGATATACTGGATCTTCTGGCTTGAGCAGTCGATTAGGGCATGGACCAAAATCTCCAGTGAAGTTTATTGGATATGATGATGGTATGTCACATGTGGAGGCGAGATATCCAGCTATACTTTTTAAGCAACAGCTAACTGCTTGTGTAGAGAAGATTTTTGGCCTTATACGAGATAATTTAAAAAAGGAGCTTTCTCCACTCCTGGGATTATGTATTCAGGCACCCAAAGCAGGACGAGTGCATGGTGGAAAGTTGGCTAGATCTCCTGGTGGGCTTCCTCAACAATCATCTGCTGGTCAGTGGGACAACATTGTCAAATTTTTGGATTCACTTATGAATCAACTACGTGGAAATCATGTGCCATCCTTCTTCATCCGTAAGCTAGTTACCCAGGTTTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTCTTGCGGCGTGAATGTTGCACATTCTCAAATGGTGAATATGTGAAGTCTGGTCTAGCAGAGCTGGAGAAATGGATAGGCAACGCAACAGAAGAGTATGCAGGAACATCCTGGCATGAACTGAATTATATAAGACAAGCTGTTGGGTTCTTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAGATTCGGCAAGACCTTTGTCCGGCATTGACTGTGAGGCAAATCTATCGCATCAGTACAATGTACTGGGATGACAAGTATGGAACCCAGAGTGTGTCCAATGAGGTAGTCAGCGAAATGAGGGAAATTGTCAGCAAGGACAATCAGAATCTAACCTCAAATTCTTTCTTGTTAGATGATGATCTGAGCATTCCTTTCTCTGCCGAAGACATAGATATGGCAATCCCTGCTATAGATCCTGATGATATTGAACTACCGGCATTCTTGTCCGAATATCCTTGTGCCCAATTTCTTATCTCACTTCAGAAGTTTGCCCTGGTGTTGCAGAACTTCATGAGCAGGCATTCCCTGCACAAGAAAGCATTCTTTGTATTCCCCGGGCTTACTTTCAAGTGGAATGGATGTTGA 4227 0.4076 MEQYKGAPFGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQSNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDAETYKLGHPSHFHYLNQSKIYELDGEAIFRVLAAILHLGNIEFSPGKEHDSSVIKDDKSRFHMQMAADLFMCDVDLLLAALCTRSIQTREGSIIKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQNFRSHPRLEKEKFSQTDFTISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLPEESSRSSYKFSSVASRFKQQLQALMETLKSTEPHYIRCVKPNSLNRPQKFENSSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSSDDKAATEKILQKLKLENFQLGRTKVFLRAGQIGILDSKRAEVLDNAARCIQRRLRTFILHRDFITVRAAAISLQACCRGCIARKIYVAKRETAATISIQKYIRMCLMRLAYLKLHSSAIIIQSHVRGFTTRTRFLHGKEHKAATIIQAYWRMSKVRSAFQQHQASIVAIQCRWRCRQAKRELRRLKQEANEAGALRLAKSKLEKQLEELTWRLHLEKKMRGSNEESKQMEITKLKKMLEALNLELDAAKLATINECNKNAVLQNQLELSIKEKSALERELVAMDEVRRENALLKGSLDAFEKKYTALELELMNARKGHNETIEKLREFEQKCSQLEQNVKSLEEKILSLEDENLVLRQKALSAPPKNNRSGFAKSLSEKYSSVIASRTERKTLFESPTPTKLIVPFTHGSTDSRRSKLTAERHQDNYEFLSRCIKENLGFKNGKPLAARIIYKCLLHWHAFESERTAIFDYIIEGINDVLKVRDDDSVLPYWLSNTSALLCLLQRNLRSNGFLTTSAQRYTGSSGLSSRLGHGPKSPVKFIGYDDGMSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKAGRVHGGKLARSPGGLPQQSSAGQWDNIVKFLDSLMNQLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIGNATEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDPDDIELPAFLSEYPCAQFLISLQKFALVLQNFMSRHSLHKKAFFVFPGLTFKWNGC* 1409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1847 1408 PANTHER PROTEIN OPAQUE1-LIKE 1 1374 - -
Dod08g1847 1408 Gene3D Kinesin motor domain 450 523 IPR036961 -
Dod08g1847 1408 Pfam IQ calmodulin-binding motif 642 660 IPR000048 GO:0005515
Dod08g1847 1408 Pfam IQ calmodulin-binding motif 616 635 IPR000048 GO:0005515
Dod08g1847 1408 Pfam IQ calmodulin-binding motif 689 709 IPR000048 GO:0005515
Dod08g1847 1408 Pfam IQ calmodulin-binding motif 664 683 IPR000048 GO:0005515
Dod08g1847 1408 Gene3D - 524 590 - -
Dod08g1847 1408 PANTHER MYOSIN 1 1374 - -
Dod08g1847 1408 CDD MYSc_Myo11 1 577 IPR036018 -
Dod08g1847 1408 CDD MyosinXI_CBD 970 1342 IPR037975 GO:0007015
Dod08g1847 1408 ProSiteProfiles IQ motif profile. 711 740 IPR000048 GO:0005515
Dod08g1847 1408 SMART iq_5 710 732 IPR000048 GO:0005515
Dod08g1847 1408 SMART iq_5 662 684 IPR000048 GO:0005515
Dod08g1847 1408 SMART iq_5 639 661 IPR000048 GO:0005515
Dod08g1847 1408 SMART iq_5 614 636 IPR000048 GO:0005515
Dod08g1847 1408 SMART iq_5 687 709 IPR000048 GO:0005515
Dod08g1847 1408 SMART MYSc_2a 1 590 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod08g1847 1408 Gene3D - 591 640 - -
Dod08g1847 1408 Gene3D - 641 688 - -
Dod08g1847 1408 Gene3D - 689 739 - -
Dod08g1847 1408 Gene3D Myosin VI head, motor domain, U50 subdomain 173 294 - -
Dod08g1847 1408 ProSiteProfiles Dilute domain profile. 1019 1319 IPR002710 -
Dod08g1847 1408 ProSiteProfiles IQ motif profile. 688 717 IPR000048 GO:0005515
Dod08g1847 1408 Pfam Myosin head (motor domain) 1 172 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod08g1847 1408 Pfam Myosin head (motor domain) 173 577 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod08g1847 1408 Gene3D Kinesin motor domain 1 172 IPR036961 -
Dod08g1847 1408 Coils Coil 808 828 - -
Dod08g1847 1408 ProSiteProfiles IQ motif profile. 663 692 IPR000048 GO:0005515
Dod08g1847 1408 SMART DIL_2 1194 1301 IPR002710 -
Dod08g1847 1408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 685 IPR027417 -
Dod08g1847 1408 ProSiteProfiles Myosin motor domain profile. 1 589 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod08g1847 1408 Coils Coil 717 768 - -
Dod08g1847 1408 Gene3D - 295 449 - -
Dod08g1847 1408 Pfam DIL domain 1195 1298 IPR002710 -
Dod08g1847 1408 ProSiteProfiles IQ motif profile. 616 644 IPR000048 GO:0005515
Dod08g1847 1408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 688 743 IPR027417 -
Dod08g1847 1408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 639 IPR027417 -
Dod08g1847 1408 Coils Coil 832 908 - -
Dod08g1847 1408 Coils Coil 773 800 - -
Dod08g1847 1408 PRINTS Myosin heavy chain signature 77 104 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod08g1847 1408 PRINTS Myosin heavy chain signature 338 366 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod08g1847 1408 PRINTS Myosin heavy chain signature 33 58 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod08g1847 1408 PRINTS Myosin heavy chain signature 285 313 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1847 Dod-Chr8 43272031 43302589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1847 1 1372 Myosins gene family AT4G33200 73.195 0.0 2096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1847 K10357 - gmx:100790815 2429.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1847 08 43272031 43302589 Dod08g1847 08 43272031 43302589 ECH
Dod09g1925 09 40807047 40817957 Dod08g1847 08 43272031 43302589 PCT