Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1845 ATGGAAGCTGCTATGGCATTTCGATTTGGGGTTGTCCTTCTTCTTGCTTTTCTCATTGGTATGAATGCAAATACAGTGGATTCAGACGATGGAGCAACATTGTTGGAGATAAAGAAGTCATTCAGGGATGTGGACAATGTTCTATATGACTGGACAGACTCCCCATCATCAGATTATTGTGTCTGGAGAGGGATTTCATGTGACAATGTCACCTTCAATGTTGTTGCACTCAATCTTTCAGGACTGAATCTTGATGGTGAAATTTCTCCTGCAATAGGGAACCTTAAAAGCTTGGTCTCCATTGATCTCAGAGAAAACCGTCTATCAGGCCAGATACCAGATGAGATTGGTGACTGTTCTTCTTTAGAGAGCTTGGACCTGTCATTTAATGAGATAAGAGGGGATATACCATATTCAATATCAAAGTTGAAACAACTGGAAAATTTGATTTTGAAAAATAACCAGTTGATTGGACCAATTCCTTCAACTTTGTCTCAGATTCCTAACTTGAAGATTCTAGACCTGGCACAGAATCATCTTAGTGGTGAAATACCAAGGCTTATATACTGGAATGAAGTTTTGCAGTATCTCGGCTTGCGAGGTAACAATTTGGTTGGTTCGCTATCGCCAGACATGTGCCAGCTAACTGGATTGTGGTATTTTGATGTGAGAAACAATAGCCTGACAGGAAGTATTCCTGAAAGCATAGGCAACTGTACTGCCTTCCAGGTCTTGGATTTATCCTACAACCAGCTAACTGGAGAGATACCGTTCAACATTGGATTTCTGCAAGTAGCTACCTTGTCATTGCAAGGCAATAAACTCTCTGGACATATTCCATCAGTGATTGGTCTCATGCAAGCACTTGCTGTCTTAGACTTGAGTTGTAACATGTTAAGTGGACCAATCCCTCCTATCTTGGGAAACTTGACTTACACAGAAAAATTGTATTTGCATGGCAACAAGCTGACTGGCTTTATCCCCCCAGAACTTGGAAACATGACAAAGCTTCACTATTTGGAACTGAATGATAACCATTTAAGTGGACATATCCCACCCGAGCTTGGAAAGCTTACTGATTTGTTCGACTTAAATGTTGCCAACAACAACCTTGAGGGGCCAATTCCTGACAATCTTAGCTCATGTAAAAGCCTTAACAGCCTCAATGTGCATGGGAACAAGTTGAGTGGAACAATTCCCCCTGCATTGAAGAGCTTGGAGAGTATGACTTATTTGAATCTTTCTTCCAACAACCTTCGAGGCTCCATTCCAATTGAACTGTCACGGGTTGGCAATTTGGATACATTGGATATTTCAAATAATAATATAATTGGCTCCATTCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGATGAACCTGAGCAGAAATCATTTAACAGGATTTATTCCAGCAGAATTTGGTAATCTTAGAAGTGTTATGGACATTGACCTTTCAAATAATCAACTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATGATATCCTTGAGGCTTGAAAACAACAAATTAACCGGAGATGTGACATCACTTGTAAATTGCCTTAGTCTTTCACAGCTTAACGTGTCCTACAACAAACTAGTTGGTGTTATTCCCACAAGTAACAACTTTTCCAGGTTCCCCCTTGACAGTTTCATTGGAAACCCTGGTCTGTGTGGCAATTGGTTGAATTCGCCCTGTCATGTTTCTCATCCTGCAGAGCGAGCTACATTATCTAAGGTGGCTATTCTAGGAATAGCTCTTGGTGGCCTTGTGATTCTTCTCATGATATTGCTGGCAGCTTGCAGACCACACAATCCATCTCCTTTTACTGATGGATCACTTGACAAACCAGTTAAATACTTGCCACCAAAACTAGTGGTTCTTAATATGAATATGGCACTTCATGTGTATGAGGATATCATGAGGATGACTGAAAACCTGAGTGAGAAGTATATAATTGGATGTGGTGCATCAAGCACAGTTTACAAATGTGTTCTTAAGAATTGCAAGCCAGTGGCTATCAAGAAGCTCTATTCTCACTATCCACAATGCTTGAAAGAATTCGAGACTGAACTTGAGACAGTTGGCAGCATTAAGCACCGCAATCTCGTCAGTCTTCAAGGCTACTCTTTTTCCTCATGTGGACACCTTCTCTTTTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTTCATGGGCCTACAAAGAAGAAAAAGCTTGATTGGGATCTGCGTCTAAAAATAGCACTTGGAGCTGCACAAGGGCTTGCTTATCTACACCATGATTGTAGTCCTCGGATCATCCACAGGGATGTGAAATCATCAAACATTCTATTAGATGGAGACTTTGAGCCCCATCTCACTGATTTTGGCATTGCCAAAAGTCTTAGCCCCTCAAAGTCCCATACATCAACTTACATAATGGGCACAATTGGCTACATAGACCCTGAGTATGCTAGAACATCCCGGCTTACTGAGAAGTCTGATGTGTACAGCTATGGTATCGTTTTACTTGAGTTGCTAACTGGGAGGAAAGCTGTTGACGATGAATCTAACCTCCATCATCTGATTTTGTCCAAGACAAAAAGCAATGCTGTAATGGAAACTGTTGATCCAGAAATTACTGCAACATGTAAGGACCTGGGAGCAGTAAAGAAGGTCTATCAGCTTGCTTTGTTATGCACAAAGAAGCAGCCAACTGATAGGCCAACAATGCATGAAGTGACACGTGTCCTTGGAAGCCTTGTGCCATCTACCACCACCCCAACGAAGCAACAAGCCCCTCCACTGCCACCACCTGCCTCTTCACTACTCCCATCTGCTAAAGTGCCTTCTTACATGGACGAGTATGCAAATCTCAAGGCTCCACACTTGGTTAACTGCCCTTCAATGAGCACCTCTGATGCACAGTTGTTCCTCAAGTTTGGAGAGGTAATCTCTCAGAACAGTGAGTAA 2973 0.4191 MEAAMAFRFGVVLLLAFLIGMNANTVDSDDGATLLEIKKSFRDVDNVLYDWTDSPSSDYCVWRGISCDNVTFNVVALNLSGLNLDGEISPAIGNLKSLVSIDLRENRLSGQIPDEIGDCSSLESLDLSFNEIRGDIPYSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNHLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVRNNSLTGSIPESIGNCTAFQVLDLSYNQLTGEIPFNIGFLQVATLSLQGNKLSGHIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMTKLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNLEGPIPDNLSSCKSLNSLNVHGNKLSGTIPPALKSLESMTYLNLSSNNLRGSIPIELSRVGNLDTLDISNNNIIGSIPSSLGDLEHLLKMNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMISLRLENNKLTGDVTSLVNCLSLSQLNVSYNKLVGVIPTSNNFSRFPLDSFIGNPGLCGNWLNSPCHVSHPAERATLSKVAILGIALGGLVILLMILLAACRPHNPSPFTDGSLDKPVKYLPPKLVVLNMNMALHVYEDIMRMTENLSEKYIIGCGASSTVYKCVLKNCKPVAIKKLYSHYPQCLKEFETELETVGSIKHRNLVSLQGYSFSSCGHLLFYDYMENGSLWDLLHGPTKKKKLDWDLRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDGDFEPHLTDFGIAKSLSPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDDESNLHHLILSKTKSNAVMETVDPEITATCKDLGAVKKVYQLALLCTKKQPTDRPTMHEVTRVLGSLVPSTTTPTKQQAPPLPPPASSLLPSAKVPSYMDEYANLKAPHLVNCPSMSTSDAQLFLKFGEVISQNSE* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1845 990 SUPERFAMILY Protein kinase-like (PK-like) 634 918 IPR011009 -
Dod08g1845 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Dod08g1845 990 Gene3D Transferase(Phosphotransferase) domain 1 728 933 - -
Dod08g1845 990 MobiDBLite consensus disorder prediction 923 942 - -
Dod08g1845 990 Gene3D Ribonuclease Inhibitor 302 574 IPR032675 -
Dod08g1845 990 ProSiteProfiles Leucine-rich repeat profile. 121 144 IPR001611 GO:0005515
Dod08g1845 990 Gene3D Phosphorylase Kinase; domain 1 627 727 - -
Dod08g1845 990 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Dod08g1845 990 Pfam Leucine rich repeat 432 491 IPR001611 GO:0005515
Dod08g1845 990 SMART LRR_typ_2 167 191 IPR003591 -
Dod08g1845 990 SMART LRR_typ_2 454 477 IPR003591 -
Dod08g1845 990 SMART LRR_typ_2 334 358 IPR003591 -
Dod08g1845 990 SMART LRR_typ_2 95 119 IPR003591 -
Dod08g1845 990 SMART LRR_typ_2 215 239 IPR003591 -
Dod08g1845 990 SMART LRR_typ_2 478 501 IPR003591 -
Dod08g1845 990 SMART LRR_typ_2 406 430 IPR003591 -
Dod08g1845 990 Gene3D Ribonuclease Inhibitor 27 191 IPR032675 -
Dod08g1845 990 Gene3D Ribonuclease Inhibitor 192 301 IPR032675 -
Dod08g1845 990 ProSiteProfiles Leucine-rich repeat profile. 169 191 IPR001611 GO:0005515
Dod08g1845 990 SMART serkin_6 652 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1845 990 SUPERFAMILY RNI-like 208 541 - -
Dod08g1845 990 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 977 - -
Dod08g1845 990 SUPERFAMILY L domain-like 28 263 - -
Dod08g1845 990 CDD STKc_IRAK 658 921 - -
Dod08g1845 990 ProSiteProfiles Protein kinase domain profile. 652 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1845 990 Pfam Protein kinase domain 655 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1845 990 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 12 977 - -
Dod08g1845 990 ProSitePatterns Protein kinases ATP-binding region signature. 658 681 IPR017441 GO:0005524
Dod08g1845 990 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1845 Dod-Chr8 43225548 43233951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1845 97 922 Receptor kinase-like Gene Family AT5G07180 67.594 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Dod08g1845 Pkinase 9.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1845 K20718 - gmx:100782307 1723.37