Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1841 ATGGCAGCAGCAGCAATCAGAAACATACGAACCATCCGAGGAAACCACTCCCTCTGGTTCTCCACCACTCTTACCGACCAATCCCGTTACCGTAAACAAATCTCCCTCGCCAACCTCTTCCAAAGGTATGGATTCCCTTCCTCCCAATTCCCCCAATTCCTCAAAAACAACCCTTTTCTCTTCCATTCCAACCTCCCTCAACTGGAGAATTCCCTTTCGTCTCTCCTCTCCCTCCGAATTCCCCAAAACACCCTCGTCTCCCTCATCCGCAATTGCCCCTCCATATTGGAACACAACTTCCTCAGCAATTGGAAGCAAAACGGTTTCTTCTCGAAGCTCGTTTCGTTGAACCCTTCCCCCTTGATGGTCGCGAACTTTTTAGAATGTTCTAGAAGGTTCGAGCTAGACCCCGCCGAGGTTTCGAAGAAAGTTGAGACCTTGAAAGGGTTAGGGTTTTCCACTGATGCTATCTCTAGGGTTTTGGAAGGGTTCCCCAGCGTGATCGTCATGAGCGAGAGGGAAGTTGCTCGTGTTGTTGAGTTTCTCGTGGAGTTTGGGATTCCCAAGGACAAGGTTGTTGATCAGGTCTTGAGGTTGAACCCTAGGGTTTTGGGGATCGGGGTTGAGGAGAGGTTGAAGCCGTTGATTCGCGAATTGAGGGAATTAGGGTTTTCGGGGCGCGAAATCAGGGGAGAGATTGTTCGGGAGCCGAGGATTTTGGGAATGGAGGTCGGGGAGTTTTCAAGGTGTTTGAGGTTGTTGGAGGGATTGAAGTGTAGGGAGGGTATCAAAGAGAGGGTCTTTGGAGAAGGTTTGTTGAGGGCTTGCTTTGAGGTGAAGCTGAGGGTGGATTGCTTGTGCAGTCACGGCTTGATTCGTAGGGACGCGTTGAAGTTGTTGTGGAAGGAGCCAAGGTTGATAACCTATGGCGTCGACGATATCGAGAAGAAGATTCATTTCTTGGTGCATAGGATGAAGTATAATGTTGATTGCTTGCCTGATGTTCCTGAATACTTGGGTGTGAACTTTGAGAAGCAGGTTGTGCCTAGGTACAGTGTGATGGAGTACTTGAGAGCAAAGGGTGCAATTGGTTTTGAGGTTGGATTGAAGGATATGGTGAAGCCAAGTAGGCTTAGGTTTTACAATCTTTATGTTAAGCCCTATCCGGAGTGCGAAAAGATTTACGGGCGATTTTCCGGAACTATGGGAGTTAAGAGCAAGCATCCGGCTGGTCTCTGGAAACTTTTTAAGCCTCAGAAGTTCCCTGAGACTGATGAAGATGCCAAGAACTTGAAGGCCTTCATGGACTCAATGGGGTAG 1320 0.4856 MAAAAIRNIRTIRGNHSLWFSTTLTDQSRYRKQISLANLFQRYGFPSSQFPQFLKNNPFLFHSNLPQLENSLSSLLSLRIPQNTLVSLIRNCPSILEHNFLSNWKQNGFFSKLVSLNPSPLMVANFLECSRRFELDPAEVSKKVETLKGLGFSTDAISRVLEGFPSVIVMSEREVARVVEFLVEFGIPKDKVVDQVLRLNPRVLGIGVEERLKPLIRELRELGFSGREIRGEIVREPRILGMEVGEFSRCLRLLEGLKCREGIKERVFGEGLLRACFEVKLRVDCLCSHGLIRRDALKLLWKEPRLITYGVDDIEKKIHFLVHRMKYNVDCLPDVPEYLGVNFEKQVVPRYSVMEYLRAKGAIGFEVGLKDMVKPSRLRFYNLYVKPYPECEKIYGRFSGTMGVKSKHPAGLWKLFKPQKFPETDEDAKNLKAFMDSMG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1841 439 Gene3D Transcription termination factor 3, mitochondrial 172 399 IPR038538 -
Dod08g1841 439 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 48 436 - -
Dod08g1841 439 PANTHER CGI-12 PROTEIN-RELATED 48 436 IPR003690 GO:0003690|GO:0006355
Dod08g1841 439 SMART mt_12 123 153 IPR003690 GO:0003690|GO:0006355
Dod08g1841 439 SMART mt_12 230 260 IPR003690 GO:0003690|GO:0006355
Dod08g1841 439 SMART mt_12 329 363 IPR003690 GO:0003690|GO:0006355
Dod08g1841 439 SMART mt_12 194 225 IPR003690 GO:0003690|GO:0006355
Dod08g1841 439 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Dod08g1841 439 SMART mt_12 51 81 IPR003690 GO:0003690|GO:0006355
Dod08g1841 439 SMART mt_12 158 188 IPR003690 GO:0003690|GO:0006355
Dod08g1841 439 Pfam mTERF 281 380 IPR003690 GO:0003690|GO:0006355
Dod08g1841 439 Pfam mTERF 135 246 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod08g1841 mTERF 8.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1841 - - cam:101513737 598.586