Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1827 ATGACAGACAAAAACCAAAGAGCAGAAGAGTCACCTGACACTGACTTTACCAATCAGTGGCCTCTTGAGCTTCCTGATGATTACTTGAAGTTTGATGATGGACATCAATGGATAGACAATGATCCTAATGATGAGCCATTTGTTTATGATGAGAATTTCTCAAAGCAGGTTTATCAGGCCAATGAAGTAGGTGACTTTGGAGGAGGTAGCAGCCACTTTGAGGGGTCGTCTTCTAGCAGAGGCGTTAGCAGTGGAAGTGAGAAGAAGGATGCTAGAGAGAGATTTGCATTCAAAACAAAGTCAGAGGTTGACGTGCTGGACGACGGATACAAGTGGAGGAAGTATGGAAAGAAGATGGTGAAGAACAGCCCCAATCCAAGAAATTACTATAGGTGTTCAGTCGACGGATGCGATGTAAAAAAGAGAGTTGAAAGAGATAAGGATGATCCAAGGTATGTAATAACAACCTACGAAGGCAAGCACACTCACCCAAGTTGCCGCTAG 504 0.4365 MTDKNQRAEESPDTDFTNQWPLELPDDYLKFDDGHQWIDNDPNDEPFVYDENFSKQVYQANEVGDFGGGSSHFEGSSSSRGVSSGSEKKDARERFAFKTKSEVDVLDDGYKWRKYGKKMVKNSPNPRNYYRCSVDGCDVKKRVERDKDDPRYVITTYEGKHTHPSCR* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1827 167 MobiDBLite consensus disorder prediction 62 93 - -
Dod08g1827 167 Gene3D WRKY domain 93 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1827 167 MobiDBLite consensus disorder prediction 1 21 - -
Dod08g1827 167 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1827 167 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 5 165 IPR044810 GO:0003700
Dod08g1827 167 SUPERFAMILY WRKY DNA-binding domain 99 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1827 167 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1827 167 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1827 167 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 5 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1827 Dod-Chr8 42878693 42880623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1827 2 165 WRKY Transcription Factor Family AT5G26170 45.000 1.15e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g1827 WRKY 5.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1827 - - gmx:100819462 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1827 08 42878693 42880623 Dod08g1827 08 42878693 42880623 ECH