LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod08g1825	ATGTGTGATGTTGACCACAGGTTAGGTACTCGAGGGGCACATGAAATCAAAGCTCATCCTTGGTTCAAGGGGGTGGAGTGGGATAAACTGTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGAGAGCTAGATACCCAAAACTTCATGAAGTTTGATGAAGTAGATCCACCATCAGCGGCAAGGACTAGGTCAGGACCCTCACGGAAGATGCCCAAAGATCTAAATTTTGTTGGTTACACTTACAAGAACTTTGATGCTGTAAAAGGGCTTTGTCAGTCTTCTGGTGATTCAATGCAAGATTTGTCTTCTAAATGGCCAGCTGAAGAACCGGGTTTACAAATCCTTGCATCATCTAGAGACCCCATGTTACCATAA	381	0.4357	MCDVDHRLGTRGAHEIKAHPWFKGVEWDKLYEMEAAFKPQVNGELDTQNFMKFDEVDPPSAARTRSGPSRKMPKDLNFVGYTYKNFDAVKGLCQSSGDSMQDLSSKWPAEEPGLQILASSRDPMLP*	127

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod08g1825	126	ProSiteProfiles	AGC-kinase C-terminal domain profile.	23	93	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Dod08g1825	126	Gene3D	Phosphorylase Kinase; domain 1	40	60	-	-
	Dod08g1825	126	PANTHER	SERINE/THREONINE-PROTEIN KINASE	1	96	-	-
	Dod08g1825	126	Pfam	Protein kinase C terminal domain	41	83	IPR017892	GO:0004674\|GO:0005524\|GO:0006468
	Dod08g1825	126	PANTHER	NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE	1	96	-	-
	Dod08g1825	126	Gene3D	Transferase(Phosphotransferase) domain 1	3	39	-	-
	Dod08g1825	126	MobiDBLite	consensus disorder prediction	53	73	-	-
	Dod08g1825	126	MobiDBLite	consensus disorder prediction	96	126	-	-
	Dod08g1825	126	SMART	pkinase_C_6	23	85	IPR000961	GO:0004674\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod08g1825	Dod-Chr8	42865161	42868378	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod08g1825	1	125	AGC Kinase Gene Family	AT4G33080	64.615	8.16e-48	158

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod08g1825	K08790		-	gmx:100805455	212.616

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod08g1825	08	42865161	42868378	Dod08g1825	08	42865161	42868378	ECH