Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1822 ATGGCCAGTGCTGGGACACCCAATTCCAATGGGAGTCAGTTTTTTATAACTCTTGACCGATGTGACTGGCTTGATCGGAAGCATACCATTTTTGGAAAGGTGACAGGAGATACAATGTATAATCTTTTGAGACTAGGGGAACTTGAAACTGATAAAAATGACCGGCCTTTAGAACCCCCAAAGATATTATCAGTTGAGGTATTGTGGAACCCATTTGAAGATATTGTGCCAAGAACACTTCAGAAAGCTCAGATTAAAGCTACACCTGACACAGACAACAAAGATTCGAAAAAGAAAGGCATTAAAAAATTGAACTTGCTTTCATTTGGGGAAGAAGCCGAAGAAGAGGAAAAGGAATTGGCATTGGTGAAGCAAAAGATTAAGAGCAGTCATGATGTCTTGAATGATCCTCGTCTTTTAAACGACAATACTAATGATATGAGTTCATCCGATGGTAAATCTACAAGGGATGTGCAGTTAACCGTGAGGGATGCCCTAAAAACCAAGAAAGAAGAGTCTCAGAAAGATTCAGAAATGGGTAACCTTGATTCCAATGACGATGATGATGATGATGGTGGTGGTAATGAAGCAGATTTTGATGCAAGAATGCGCATGCAAATACTGAAAAAGCGGAAGGAGTTGGGTGATCTCCCTCCCAAGCCAAAGTTGCAAAATGGTACTGGAAGATCCAGTTCAGAGCACCGGGATACGTCAGCAGCAAGGTCAAATGCTGCAAGTGTTGATGATGATGATCATCCAAGGGTGGAAAAATTGTCCTTGAAGAAAAAGGGAATAGGATCTGAAGCAAGGGCTGATCGAATGGCTAATGCGGATGCAGATTTGCAGCTATTGAATGAATCTGAGAGAGGAAGACAATTGCAGAAGCAGAAGAGACGTAGATTACAAGGGCGTGAAGACGAAGTTCTAGCCAAACTTGAGAAATTCAAGAGTTCTTTGTCAGCAAAGACGGCACCCAAAACTGATGAACCTGTGGATGGTGGTAATGATGAGGGATTGTCTGACTGGAAAGGTGTTGGCTTAAAATTTGCCCCCGAGTCTGGCAAGGATCGCATGTCTCGCAATGAAGACCCAAATGACTATGTTGTGCATGACCCTCTTTTGGAGAAAGGGAAAGAGAAGTTCAACAGGATGCAAGCAAAACAAAAGAGACGAGAACGAGAGTGGGCTGGGAGATCCCTCACTTGA 1206 0.4287 MASAGTPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGELETDKNDRPLEPPKILSVEVLWNPFEDIVPRTLQKAQIKATPDTDNKDSKKKGIKKLNLLSFGEEAEEEEKELALVKQKIKSSHDVLNDPRLLNDNTNDMSSSDGKSTRDVQLTVRDALKTKKEESQKDSEMGNLDSNDDDDDDGGGNEADFDARMRMQILKKRKELGDLPPKPKLQNGTGRSSSEHRDTSAARSNAASVDDDDHPRVEKLSLKKKGIGSEARADRMANADADLQLLNESERGRQLQKQKRRRLQGREDEVLAKLEKFKSSLSAKTAPKTDEPVDGGNDEGLSDWKGVGLKFAPESGKDRMSRNEDPNDYVVHDPLLEKGKEKFNRMQAKQKRREREWAGRSLT* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1822 401 SUPERFAMILY Cyclophilin-like 1 80 IPR029000 -
Dod08g1822 401 MobiDBLite consensus disorder prediction 353 401 - -
Dod08g1822 401 Gene3D - 1 82 IPR029000 -
Dod08g1822 401 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 67 IPR002130 GO:0000413|GO:0003755
Dod08g1822 401 MobiDBLite consensus disorder prediction 157 181 - -
Dod08g1822 401 Coils Coil 106 126 - -
Dod08g1822 401 MobiDBLite consensus disorder prediction 224 244 - -
Dod08g1822 401 MobiDBLite consensus disorder prediction 299 313 - -
Dod08g1822 401 MobiDBLite consensus disorder prediction 196 218 - -
Dod08g1822 401 MobiDBLite consensus disorder prediction 245 275 - -
Dod08g1822 401 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 67 IPR002130 GO:0000413|GO:0003755
Dod08g1822 401 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 1 102 - -
Dod08g1822 401 MobiDBLite consensus disorder prediction 134 401 - -
Dod08g1822 401 MobiDBLite consensus disorder prediction 136 156 - -
Dod08g1822 401 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 1 102 IPR044666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1822 Dod-Chr8 42816651 42827823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1822 1 72 U-box Gene Family AT5G67530 41.667 7.46e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1822 K12737 - gmx:100793148 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1822 08 42816651 42827823 Dod08g1822 08 42816651 42827823 ECH