Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1821 ATGTCGCTTTCAAACACCATCACAATGGTGGCCGTAGACAAAGATAAGAACAGCCTTCGTGCCTTTCGTTGGGCAACTCAGAATCTTGATAACCCAATCGTCATTGCGGTTCATGTCAAGCACAAAGACAATCATCATCAGGGCACGAATGTTTTCCGACCTGACGAGGATGATTTGGAGAATATTTTCTATCAATTACGTGAAGAGTGTCCTCCTAAAGTCGTTAAGATGAAAGAGGCTGTAATCGATGATACTGATATCGTGAGAGGAATTTTGGAATATGCACAGAGGAATCACGTCCATACTATTGTCGTTGGTGCACCCACCACGAACAATAACACTTTGACAAAGTCTATTCTCAGCAAGGCAGGAAGCAAGAAATATAAAGGCCCTGATATAGGATCAGCTATAATCAAATCAGCTCCAGATTATAGTTGCGTGTATGTAATCTCAAAAGGGAAGGTAGTGGCGGAACGACAAGCAACACGCCCATTGATTACAACAAACAGTCAGAAACATGCTCCTCCACCTATTAGTGAGTCAGGAAAAGGAGTAAGGTGCCAAGGAATGAAATTTATGAGCAATTCATGGAGCACCAATGAACGATCAGGCAGAGCATTTGTATGTGAGAGGAGTCAAAGTGCACGTAGGGAAAGGTCACAATATAGCATCATCCACAACTCAAGCTCTGATGATGAGAGTGACTTTTCACGGTCAATGGAAAGGACTAGACACGATTCGGACCTAAGCTTTACATCAAATCCCCACTCTTCCTCATTACAAAGCTTAAAATCTAAAAGAGAAAAGAGTGATGTGGAAGCTGAGATGATTAGATTGAAGCTCACATTGAAGCAAACTATGAACATGTACAACTTAGCTTGCAAAGAAGCAATCGCAGCTCAAAATAAGGCTAAAGAGATTACTCAGTGGAAAATGGAGGAGGCACGTAAGGTTGAGGAAGCTAGGTTGGCTGAAGAGGCAGCTCTTGCACTTTCAGAACACGAGAAGGCCAAAGCTAAAGCTGCCATGGTAGAAGCTGAGGAAGCCATGAAGTTAGCTGAAAAGGAAGCACATAAAAGAAGGCAAACTGAGATGAAGGCCAGGAGAGAGATAGAAGAGAAAAATAGGGCCTTAACTGCTTTGACTCAAAAGGATGACCGATATAGGAAATACACCATAGATGATATTGAAAAAGCTACTGAAAGGTTCTCCTTATCAATGAAAATAGGACAAGGTGGATTTGGACCTGTGTTTAAAGGCAAAATTGATCACACTCCGGTTGCAATCAAAATTTTGAGCCCTGATGCTACTCAGGGCTGGAAGCAGTTCAACCAAGAGGTTGAGGTATTATGCAGCATTAAGCATCCAAACATGGTCCTCCTACTTGGTGCCTGTCCTGACTACGGATGCTTGGTGTATGAATACATGGATAATGGTAGCTTAGAAGACAGATTGCTGAGGAAACAAAACACACCCCCTATCCCATGGGCGAAACGGTTCGAGATAGCTGCACAGATTGCAACTGCACTCCTCTTCCTTCACCAATCAAAGCCAGAGCCCCTTGTTCACCGGGACCTAAAGCCGGCGAACATTCTCCTGGACCGGAACTATGTGAGCAAGATAAGCGATGTCGGTCTGTCGCGACTAGTCCCTCCTTCTGTAGCTGACTCCGTGACACAATATCACATGACTTCAGCGGCTGGAACACTCTGTTACATTGATCCTGAGTACCAACTAACAGGGATGCTAACAACAAAGTCAGACATATACTCTTTGGGGATAATGCTGCTTCAGATTATCACAGCAAGGCCTCCAATGGGGCTGTCTCATTATGTTAAGAGGGCAATTGAAAAGGGTACATTCTCAGATATGCTTGATCCTGTGGTGACTGATTGGCCGGTTGAAGAGGCACAAGCATTTGCTGAATTGGCACTCAAGTGCTCAGAACTCAGCAAGAAGGATAGGCCAGATCTTGCATCAGTTGTAGTGCCAGAGCTCAATCGTTTAAGAGACTTTGGCTATGTGTCACTTTATAATCAGATTGAGAGTCGGAGTCACAATGCTGCACATACACGGCCTCCTACCCCAACAAGAAGAAATCGACACTGA 2109 0.441 MSLSNTITMVAVDKDKNSLRAFRWATQNLDNPIVIAVHVKHKDNHHQGTNVFRPDEDDLENIFYQLREECPPKVVKMKEAVIDDTDIVRGILEYAQRNHVHTIVVGAPTTNNNTLTKSILSKAGSKKYKGPDIGSAIIKSAPDYSCVYVISKGKVVAERQATRPLITTNSQKHAPPPISESGKGVRCQGMKFMSNSWSTNERSGRAFVCERSQSARRERSQYSIIHNSSSDDESDFSRSMERTRHDSDLSFTSNPHSSSLQSLKSKREKSDVEAEMIRLKLTLKQTMNMYNLACKEAIAAQNKAKEITQWKMEEARKVEEARLAEEAALALSEHEKAKAKAAMVEAEEAMKLAEKEAHKRRQTEMKARREIEEKNRALTALTQKDDRYRKYTIDDIEKATERFSLSMKIGQGGFGPVFKGKIDHTPVAIKILSPDATQGWKQFNQEVEVLCSIKHPNMVLLLGACPDYGCLVYEYMDNGSLEDRLLRKQNTPPIPWAKRFEIAAQIATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLSRLVPPSVADSVTQYHMTSAAGTLCYIDPEYQLTGMLTTKSDIYSLGIMLLQIITARPPMGLSHYVKRAIEKGTFSDMLDPVVTDWPVEEAQAFAELALKCSELSKKDRPDLASVVVPELNRLRDFGYVSLYNQIESRSHNAAHTRPPTPTRRNRH* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1821 702 Gene3D Transferase(Phosphotransferase) domain 1 476 681 - -
Dod08g1821 702 SMART serkin_6 403 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1821 702 Pfam Protein tyrosine and serine/threonine kinase 405 662 IPR001245 GO:0004672|GO:0006468
Dod08g1821 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Dod08g1821 702 Gene3D HUPs 5 121 IPR014729 -
Dod08g1821 702 Coils Coil 329 384 - -
Dod08g1821 702 Gene3D Phosphorylase Kinase; domain 1 372 475 - -
Dod08g1821 702 Pfam Universal stress protein family 9 108 IPR006016 -
Dod08g1821 702 CDD STK_N 10 153 - -
Dod08g1821 702 SUPERFAMILY Protein kinase-like (PK-like) 386 662 IPR011009 -
Dod08g1821 702 ProSiteProfiles Protein kinase domain profile. 403 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1821 702 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 5 694 - -
Dod08g1821 702 PANTHER OS02G0152300 PROTEIN 5 694 - -
Dod08g1821 702 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 108 - -
Dod08g1821 702 MobiDBLite consensus disorder prediction 218 269 - -
Dod08g1821 702 MobiDBLite consensus disorder prediction 231 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1821 Dod-Chr8 42806886 42813149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1821 77 673 Receptor kinase-like Gene Family AT5G12000 57.027 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dod08g1821 PK_Tyr_Ser-Thr 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1821 - - aip:107647694 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1821 08 42806886 42813149 Dod08g1821 08 42806886 42813149 ECH