Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1817 ATGATGCACATGACCTTGTATTGGGGCACGGAAGTGACCCTTCTATTCGATTCGTGGAAGACCGAGTCATGGGCGAGTTACTCACTGAGTCTGCTCGCTCTCCTCGCTGTCGCTGCACTCTTCCAGTATCTTGAGAACCGCCGTGTTCGCCTGAGACTCTTCCCCGGCGCCGGAGTGAGAACGCCGCCAACGACGGAGGTGCCGGCGGCGCGGGCACCACTTCTGGAATGGAAGTTTTCAAGGGATAAGGCGAAACTGGGTGTGAAGTTTGCAGGTGCTGTTCTCTTTGGGGTGAATTCAGGGATAGGGTATTTGTTGATGGTAGCAATTATGTCATTCAACGGAGGGGTTTTTGTTGCAATTGTTTTGGGGCTCACGGTTGGTTACTTCTTCTTCAGGAGTGAGGTTGTTGACAATGATGATAATGGTGCTGATGCTGTTGTTGAGAGTTCTTGTGCGTGTGCTTAG 468 0.5171 MMHMTLYWGTEVTLLFDSWKTESWASYSLSLLALLAVAALFQYLENRRVRLRLFPGAGVRTPPTTEVPAARAPLLEWKFSRDKAKLGVKFAGAVLFGVNSGIGYLLMVAIMSFNGGVFVAIVLGLTVGYFFFRSEVVDNDDNGADAVVESSCACA* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1817 155 Pfam Ctr copper transporter family 4 132 IPR007274 GO:0005375|GO:0016021|GO:0035434
Dod08g1817 155 PANTHER CTR FAMILY COPPER TRANSPORTER 1 155 - -
Dod08g1817 155 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 155 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1817 Dod-Chr8 42743452 42744253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1817 1 155 Inorganic Solute Cotransporters AT5G20650 50.323 9.32e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1817 K14686 - gmx:100801036 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1817 08 42743452 42744253 Dod08g1817 08 42743452 42744253 ECH
Dod08g1817 08 42743452 42744253 Dod09g1917 09 40749906 40751050 ECH