Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1813 ATGTTGAATAAGAACAAGCCTTCCGTGGCTACTACTACTAGTGTTACTAGTGATTCCACCGTGCACAACCCTTCTCTCAATGACCCTTGCTCAAACAATGATGCCAATAGCTGTAAGATGTACAAAGGGGTGAGGAAGAGGAAATGGGGCAAATGGGTATCTGAAATTAGGCTCCCCAATAGCCGTGAACGCATATGGTTGGGGTCTTATGATACCCAAGAAAAAGCTGCTAGGGCCTTTGATGCTGCACTTTATTGCCTACGTGGTCGCCATGCCAATTTCAATTTCCCTGACACCCCTCTTAACTTGGAGATCACTAATGTCCACTCCCTTTCCCACCATGAAATTCAAGAGGTTGCACAGAAGTTTGCTAATGATATAACACCACTAATTGAGAGTGAGAATATTAACCAAGAAGATGAAGATCAGGAAGAAGAAGAACCATCATTGGAGTCACAAAATGGTGCTAATTCCCTTGGATTGTTTGAATCCAATCTAAGGGAGAGAAGCATATTATCCCCCGAGTATGATTATGATGGCACTATGCAAGTGGACTATGGGGACATGAGGGCCATGGATTGGACATTTTTGAACATGTTGGATCATGACTCGAATTATAATGACATCGGGGTCGCTGGCTATGATTTTGGACTCTACTATGGGCTAGATAAGGTGCACTCAGGTGAGTTGTTATATTCCACTCCACCACCAACCCTTTTTGAGGATAACAATAATGGGGAAGAAATTGAAGGTGATGATGCTTTCTCTAACCATTCATTCCTTTGGAGTTGGAATTTTTGA 801 0.427 MLNKNKPSVATTTSVTSDSTVHNPSLNDPCSNNDANSCKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQEKAARAFDAALYCLRGRHANFNFPDTPLNLEITNVHSLSHHEIQEVAQKFANDITPLIESENINQEDEDQEEEEPSLESQNGANSLGLFESNLRERSILSPEYDYDGTMQVDYGDMRAMDWTFLNMLDHDSNYNDIGVAGYDFGLYYGLDKVHSGELLYSTPPPTLFEDNNNGEEIEGDDAFSNHSFLWSWNF* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1813 266 MobiDBLite consensus disorder prediction 137 157 - -
Dod08g1813 266 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Dod08g1813 266 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Dod08g1813 266 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 266 - -
Dod08g1813 266 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Dod08g1813 266 Pfam AP2 domain 41 89 IPR001471 GO:0003700|GO:0006355
Dod08g1813 266 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
Dod08g1813 266 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 19 266 - -
Dod08g1813 266 CDD AP2 41 99 IPR001471 GO:0003700|GO:0006355
Dod08g1813 266 SUPERFAMILY DNA-binding domain 40 98 IPR016177 GO:0003677
Dod08g1813 266 MobiDBLite consensus disorder prediction 1 29 - -
Dod08g1813 266 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1813 Dod-Chr8 42661298 42662678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1813 41 196 AP2-EREBP Transcription Factor Family AT1G19210 51.705 1.04e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod08g1813 AP2 6.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1813 - - lang:109358241 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1813 08 42661298 42662678 Dod08g1813 08 42661298 42662678 ECH
Dod08g1813 08 42661298 42662678 Dod09g1907 09 40639819 40640616 ECH