Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1808 ATGGAATCTGAGGATTTAGTGAAACAAGAATTGGAGGAATTGCAGAAGCAATTGGGGAAGAAGCAAAAATTCGAGACCGCTGTTTCGTCTCTCAAATCCCTGCTTCAACGAGCATATCCATCAGCTTCTCCCTCCCTTCGTAAATCTTTCTTTACAGTTATAAGCCGAGTTGCTACTGTGTTGAAGACCAGATACACTGCACCTGGTTTCTGGAATGCTGGCCTGGCCCTTTTTGAGCATGCTCAATTGCTTGCTTCTGAACCTTCCGAAAAGGAGCACTTGAAGGCTTGCATTGCTCAGGCACGGGAACATTTGCATTTAGAAGACAACCCCTCACAAGCTTCGTTTCCTGCACAGAATCAGGCAAATGGAGGATATCTTTTTGAGGGGCACCTTACTGTAGATCCAGAGCCTCCACAGCCTCAATGGTTGGTGCAGTCAAACCTCTTGACAACAGCTGCTACATTGTTTGCTGCTGAATCCTCTCAAGGTTCAGCAGCAAATGATACCACACCAGAGAATGCCGCAAACGTGCTTCAAGAGCTGATGAGTAGATTGGAAGAAGTTATGCCCCTGATGGTGGATGATGGTCCTGCAGCTCCAAGGGCGGCCCCTCCTGCCAGTAAAGAAGTTGTGGCAAAACTTCCGGTCATTACTCTCAGAGAGGAAATCCTGGCTAAGCTGGGGAAAGATGCAGAGTGTGCAATTTGCAAGGAGAATTTGGCTTTAAATGACAAAATGCAAGAATTGCCTTGCAAGCACACCTTCCACCCTCCATGTTTGAAGCCGTGGCTGGATGAACACAATTCTTGTCCAGTCTGTCGGTATGAGCTGCAAACTGATGATCATGCCTATGAGAGCTGGAAGGAACGTGAAAAGGAAGCTGAAGAAGAGAGGAAAGGTGCTGAGAATGCCGTTCGAGGTGGTGAATATATTTATGTCTAG 945 0.4698 MESEDLVKQELEELQKQLGKKQKFETAVSSLKSLLQRAYPSASPSLRKSFFTVISRVATVLKTRYTAPGFWNAGLALFEHAQLLASEPSEKEHLKACIAQAREHLHLEDNPSQASFPAQNQANGGYLFEGHLTVDPEPPQPQWLVQSNLLTTAATLFAAESSQGSAANDTTPENAANVLQELMSRLEEVMPLMVDDGPAAPRAAPPASKEVVAKLPVITLREEILAKLGKDAECAICKENLALNDKMQELPCKHTFHPPCLKPWLDEHNSCPVCRYELQTDDHAYESWKEREKEAEEERKGAENAVRGGEYIYV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1808 314 SUPERFAMILY RING/U-box 228 281 - -
Dod08g1808 314 Coils Coil 285 305 - -
Dod08g1808 314 CDD RING-H2_RNF126_like 233 275 - -
Dod08g1808 314 ProSiteProfiles Zinc finger RING-type profile. 234 275 IPR001841 -
Dod08g1808 314 PANTHER ABI3-INTERACTING PROTEIN 2-1 7 308 - -
Dod08g1808 314 Pfam Ring finger domain 233 275 IPR001841 -
Dod08g1808 314 SMART ring_2 234 274 IPR001841 -
Dod08g1808 314 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 7 308 - -
Dod08g1808 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 281 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1808 Dod-Chr8 42570932 42574576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1808 7 314 C3H Transcription Factor Family AT5G20910 64.401 1.30e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1808 K16274 - gmx:100798732 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1808 08 42570932 42574576 Dod08g1808 08 42570932 42574576 ECH