Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1805 ATGGTTTGTGAGATGGAGAGTGACTGTATTGAGGACATGGACATTGAAGGCCTCCCTTCAATGTGGCCTGAAGATATTGGAACCGATGTTGGTAAACAGTTCAATATAGAAAAGCCTGGAGAAAGGGACCAAGATATGTTGGAGGAGGTTACAATCATGGAGGAGCCAACTATAGCCGATTTCCAGCGCCTCATGGAGCTTACCAATTATACAGATAAAGGGTCTTCTCAGTTGGCATACCTCATGAAACACTGGGAGTATAAGCAGGCCAATGCGGTCCGTCTTCTCAGGGAAGAACTCGACAACCTTAGCAGGCAGAGGCAGGAAGTTGAGCTCAGGAAGTTGGAGATATTGGAAGACAATCGATTCGAGGAAGAAAATTATGGGGGCGACAAACGGCCGGTTTCTATATTGGATGAAATTTACTATACATGGGAGGATGTGCCAATCAGGAAAAGTGGTGTTGTTGTTCAGAGCAAGAGAATTGAAGTTGAAGCAGAGTTTGATTCTGTTGTATACTGGAAACAACGGGCGCTGCAGTTTGAAAGACAGTTGGAGGCAAGTATCCACAGAGAACAAATTCTTGAGGAGAAGTTGCAAGAAAGTATAAAGAACATTGAAAGGCAGGCCTCACCTGTGGAGGAACTCTCCCAGATTCTGAAGAGGGCAGATAATTTCTTACATTTTATCCTCCAAAATGCACCTGTTGTTATTGGCCATCAGGACACAGAGTTGCGCTATCGCTTTATCTATAATCATTTTCCAAGTCTGCAAGAGGAGGACATCATAGGAAAAACGGATGTCGAAATTTTCACAGGATCTGGTGTCAAGGAATCTCAAGATTTTAAGAAAGAAGTTATGGAGAAAGGATTGCCTGCAAAAAGGGAAATTACTTTTGAAACAGAATTATTTGGCTCAAAGACATTCTTGATATATGTAGAACCTGTCTTTAGCAAGGCAGGGGAAACAATAGGAATAAATTATATGGGAATGGAAATAACAGATCAGGTGAGAAAAAGAGAGAGGATGGCAAAACTTCGAGAAGAGATTGCAGTTCAGAAAGCCAAGGAAACAGAATTGAATAAAACCATTCATATTACAGAGGAGACAATGAGAGCAAAACAAATGTTGGCAACAATGTCTCATGAGATAAGATCACCATTGTCTGGGGTTGTGAGCATGGCCGAAATTCTTTCAACCACAAAACTTGATCGCGAGCAAAGACAGCTCTTAGATGTCATGATATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATTCTTGATCTTTCAAAGGTTGAGTCAGGAGCTATGAAATTGGAAGCCACCAAATTTCGACCGAGAGAGGTGGTAAAGCATGTACTCCAGACAGCTGCAGCATCATTGCAGAAAATGCTAACCTTAGAAGGAAATGTGGCAGATGATATACCTATTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAGATTCTCACAAATTTAGTCAGCAATGCAGTCAAGTTTACACATCAAGGCAAAGTTGGTATAAACCTTTATGTTGTGCCAGAGCCACCTTTTGCCAAATCAGAAGAAGACCACCAAAAGATGACCTCAGACCATTCAACTATTTGTGCAAATGGAGTAAAGGAACATAAATATCTATCAACACCTAAAAGTGGCAGTGATCAAAACCATCTTGATGGTCAAAACCACAACGACCACCCAAGCCAAAATCATGCATTTAATGATGAATGTAGATCTTCAGTTAAAAGTGAACACTTAATGATTGGAGATGCTGAAGAGCAAAGTCACTCAACTGAAACAACAGTTTGGATACGTTGTGACGTGTATGATACAGGAATTGGGATACCAGAAAAGGCTATACCTACATTATTTAAAAGGTATATGCAAGTCAGTGCAGACCACGCTCGAAAGTATGGGGGCACAGGGCTAGGACTAGCAATCTGCAAACAACTGGTTGAGTTAATGGGTGGTCGTCTAACAGTATCTAGCAAAGAACATGTTGGTTCTACCTTCACATTCATACTTCCATACAAGGTTTCAACAGCTTGTGATAATTCTGATGACACGGATGAGCTCTCAGACGTGGAGAATAATGATGATGCCATGTCTGATGACACAACACAAGGCTTCTTCCAATTCCAACCACGCACTTTAGGCTCTTTGTTCTCTTCCAATGGATCTAGCTGCAGGCCGCAGAATTTATTATCAGGATACAGAAGCTCACACAAGTTTAATGGGTTTCCACAGAATTCTTACTCATTATCAGTTACAAACATCACATCAAAAGGGTTAAATTCAGTTGAAGATGCATCTTCAGTAGTTGTTGATGTCACTGAAATGCCTGAATCAACAAGTTCATCAAACCATAGCACAGAAAAAGAACACGAAAATTTAGTTAGTAGAGACAAATTGCATAGTGATAAGGCACATGCCATGTTACAGAATGGTAATGTAGATTCTTCTCAACTTAAGAAGGAAAGTAGACAAATTACTGAAGCAATAAAGTCAAGTGAACCTGAGCATACATGTCAGGGTCAAGTGAAGGGAGATGTAACTTCCCAATGTGTTACTAGCAGCAGCAGATCATTAGAAGTAACAAAATCCACATTAAAGCCCAAGATCCTTCTTGTTGAAGATAACAAGATCAATGTCATGGTGACGCAGTCAATGATGAAGCGGTTAGGTTATAGCATGGATGTTGTGAATAATGGAGTGGAAGCCGTACACGCAGTTCAGCGCCACACTTATGACCTCATTCTGATGGATGTTTTCATGCCAGTTATGAATGGTCTTCAGACTACAAAACTAATTCGATCTTATGAGGAAACGGGAAACTGGGATGCTGCAAGAAAAGCTGGAATTGACCAAATACAACCAGCTTCAGATTATGAATGTTCTGTAACACCCAAAAGGCGGATCCACATTATTGCGATGACAGCAAACACAATGTCAGAGAGTGCTGAAGAATGTTATGCAAATGGTATGGACTCGTTTGTATCAAAACCTGTGACTTTCCAAAAATTGAAAGAGTGTCTTGAACAGCACCTAATGTGA 3060 0.4062 MVCEMESDCIEDMDIEGLPSMWPEDIGTDVGKQFNIEKPGERDQDMLEEVTIMEEPTIADFQRLMELTNYTDKGSSQLAYLMKHWEYKQANAVRLLREELDNLSRQRQEVELRKLEILEDNRFEEENYGGDKRPVSILDEIYYTWEDVPIRKSGVVVQSKRIEVEAEFDSVVYWKQRALQFERQLEASIHREQILEEKLQESIKNIERQASPVEELSQILKRADNFLHFILQNAPVVIGHQDTELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVKESQDFKKEVMEKGLPAKREITFETELFGSKTFLIYVEPVFSKAGETIGINYMGMEITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRQLLDVMISSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKMLTLEGNVADDIPIEVIGDVLRIRQILTNLVSNAVKFTHQGKVGINLYVVPEPPFAKSEEDHQKMTSDHSTICANGVKEHKYLSTPKSGSDQNHLDGQNHNDHPSQNHAFNDECRSSVKSEHLMIGDAEEQSHSTETTVWIRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHVGSTFTFILPYKVSTACDNSDDTDELSDVENNDDAMSDDTTQGFFQFQPRTLGSLFSSNGSSCRPQNLLSGYRSSHKFNGFPQNSYSLSVTNITSKGLNSVEDASSVVVDVTEMPESTSSSNHSTEKEHENLVSRDKLHSDKAHAMLQNGNVDSSQLKKESRQITEAIKSSEPEHTCQGQVKGDVTSQCVTSSSRSLEVTKSTLKPKILLVEDNKINVMVTQSMMKRLGYSMDVVNNGVEAVHAVQRHTYDLILMDVFMPVMNGLQTTKLIRSYEETGNWDAARKAGIDQIQPASDYECSVTPKRRIHIIAMTANTMSESAEECYANGMDSFVSKPVTFQKLKECLEQHLM* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1805 1019 Coils Coil 343 363 - -
Dod08g1805 1019 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 459 678 IPR036890 -
Dod08g1805 1019 CDD REC_hyHK_CKI1_RcsC-like 876 1014 - -
Dod08g1805 1019 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 371 437 IPR036097 GO:0000155|GO:0007165
Dod08g1805 1019 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 5 1018 - -
Dod08g1805 1019 SMART HisKA_10 372 437 IPR003661 GO:0000155|GO:0007165
Dod08g1805 1019 Gene3D PAS domain 209 349 - -
Dod08g1805 1019 Gene3D - 438 685 IPR036890 -
Dod08g1805 1019 Coils Coil 93 120 - -
Dod08g1805 1019 SMART HKATPase_4 483 681 IPR003594 -
Dod08g1805 1019 Gene3D - 360 437 - -
Dod08g1805 1019 SUPERFAMILY CheY-like 874 1018 IPR011006 -
Dod08g1805 1019 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 5 1018 - -
Dod08g1805 1019 SMART REC_2 874 1014 IPR001789 GO:0000160
Dod08g1805 1019 MobiDBLite consensus disorder prediction 547 576 - -
Dod08g1805 1019 Pfam His Kinase A (phospho-acceptor) domain 374 437 IPR003661 GO:0000155|GO:0007165
Dod08g1805 1019 Gene3D - 867 1019 - -
Dod08g1805 1019 ProSiteProfiles Histidine kinase domain profile. 379 681 IPR005467 -
Dod08g1805 1019 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 679 IPR003594 -
Dod08g1805 1019 PRINTS Bacterial sensor protein C-terminal signature 665 678 IPR004358 GO:0016310|GO:0016772
Dod08g1805 1019 PRINTS Bacterial sensor protein C-terminal signature 606 620 IPR004358 GO:0016310|GO:0016772
Dod08g1805 1019 PRINTS Bacterial sensor protein C-terminal signature 641 659 IPR004358 GO:0016310|GO:0016772
Dod08g1805 1019 CDD HATPase_EvgS-ArcB-TorS-like 488 678 - -
Dod08g1805 1019 Pfam Response regulator receiver domain 876 944 IPR001789 GO:0000160
Dod08g1805 1019 Coils Coil 189 209 - -
Dod08g1805 1019 MobiDBLite consensus disorder prediction 551 570 - -
Dod08g1805 1019 CDD HisKA 371 433 IPR003661 GO:0000155|GO:0007165
Dod08g1805 1019 ProSiteProfiles Response regulatory domain profile. 875 1018 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1805 Dod-Chr8 42523644 42531100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1805 1 540 Histidine Kinase Gene Family AT5G10720 68.248 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod08g1805 HATPase_c 1.5e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1805 - - gmx:100796072 1683.69