Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1793 ATGGAACTCAAAGTTTTGATGCTGCAATGCAATGTTGAATTAACAAAAATCCCATCCTCATTTTTCCTTCACATGCCCCTTCTGCAGATCATGGACTTATCATACACTAGTGTGAGAGAACTGCCACGCTCCTTCTTCTTTTTGGAGCAGCTTAGAGAATTATATATGAAAGGATGTGAATGCTTCATGAAATTACCACCTGAAATTGGAAATTTGCAAAAACTTGAGAAGCTTGATCTTGATGAGACTCAGATCACACATCTGCCAGAAGAGGTCCGAAAGTTAACCAATATGCAAAGCTTGACTCTCTACTTTTATGAATATCGTGGCAAGAAGAATAAGCCGTATTCATATTCAACAATTATTCCTTCTGGAGTATTGTCCAAACTCAAGCGGTTGAAACATTTAAGTATTGGTGTAAACCCTGATGATGAGCGGTGGCATGACAATGTACAAGTCATTCTACCAGAAATATTGGGATTAGAGTTGTTACAAACTCTTAGCATATATATCCCACAGTTGGAACTTTTGAAGCTCATTCCAGCTTACATTCTTGAAGAAGTTGATTTCAGATTCATTGTTGGTCGTCATATGCAGCGAATCATATCAAGCATACCACCTGCCATTGATGTAAAGTTCAACCAAAGTGACTGTAGCTTGAAATTTGTAAAAGGTAAGGATGTCCCAGCTGAAATAAAGAAGCTTCTTAGACACAACAAGGCTCTTTTCTTGGATCGACATGTCACCATAAAGAGTCTATCTGAATTTGGAATGGAAAATTTAGAAGAACTACGGGTTTGCATATTGGCAGAATGTAAAGAAATGCAGACAATTGTTGAAGGAGGATCCGGAGACTCAAATGGGAATTGTGATATGCTTCCGCATTTGCTATACTTGAGTGTATCCCACATGAAGAATCTAAGAAGCATCTGGGAGGGACCAACTACTACTCGTTTCTTATTTGGTATGTTGCAGTCCTTATCTTTGCAAAGTTGTCCCAAGTTAATGACTCTCTTCTCTTTGGATTTTTTGGGAAATCTTTCTTTGTTGAAGGAGCTTATAGTCAAAGACTGTCCCAAATTAAGCACCTTAATAAATTGGGAATCATTAATGCACAATGCATATACTTTCCTCCCCAAATTGAGGAAGTTATCACTTCTCCATCTCCCTGAATTGACCAGCATCTGGAATGGGTTGCATATTGGGCTTGGTTTAAAAGAAATAGCATTCTATGGCTGCCCAAAGCTATGTAGCCTTTCAAGGAAGGAATTGGCAAGTAATGCACTAACGGCAATCAAAGGAGAAACCAATTGGTGGAACTCTCTAAAAGGTCGACCATCTGTGTTTGACAAGATTTTTATCCCAATTCATGAAGAGGCAGAAGTGATGACTCAATTAGGTATACATAACAATGACGACATTGATAATTGTCCAGGTGGCTCAATGGGTAAGACATCACAGCCCACAGATGTTGCAACTCCGGTATTAAATTTCCCCCAGGATCTGACTCCCAGTCTCAAGGGTCGCAGATACATAAAGCAAAGGAATTCAGAAACACGGGAAATATATTCACCTTCTCTGGAGGATGGATACACATGGAGAAAATGTGGCCAGAAAGAAGGTCTAAAGATGAAGTATCCAAGGTCTTATTACAAATGCATTGATCAGAAGCACCGTGGTCACCGTGGGTGCCCAGCCAGAAAGCAAGTTCAAAGGGTAGATGAGGACCCTTCTTCATTCAGAATTACATACAGTGGGCATCACACTTGTAATGTGCCACATAATATTCCGCCATTGAATCGGAATTCTGTTGACAAGTCTGTCACAGAAAGTAATTACATGGGAAAGCATACTGATCCAAATTCATATTGGGACGGCGAATTTGCAAGGGGTTCGATAAAGTATTACAGATTGTAA 1917 0.3965 MELKVLMLQCNVELTKIPSSFFLHMPLLQIMDLSYTSVRELPRSFFFLEQLRELYMKGCECFMKLPPEIGNLQKLEKLDLDETQITHLPEEVRKLTNMQSLTLYFYEYRGKKNKPYSYSTIIPSGVLSKLKRLKHLSIGVNPDDERWHDNVQVILPEILGLELLQTLSIYIPQLELLKLIPAYILEEVDFRFIVGRHMQRIISSIPPAIDVKFNQSDCSLKFVKGKDVPAEIKKLLRHNKALFLDRHVTIKSLSEFGMENLEELRVCILAECKEMQTIVEGGSGDSNGNCDMLPHLLYLSVSHMKNLRSIWEGPTTTRFLFGMLQSLSLQSCPKLMTLFSLDFLGNLSLLKELIVKDCPKLSTLINWESLMHNAYTFLPKLRKLSLLHLPELTSIWNGLHIGLGLKEIAFYGCPKLCSLSRKELASNALTAIKGETNWWNSLKGRPSVFDKIFIPIHEEAEVMTQLGIHNNDDIDNCPGGSMGKTSQPTDVATPVLNFPQDLTPSLKGRRYIKQRNSETREIYSPSLEDGYTWRKCGQKEGLKMKYPRSYYKCIDQKHRGHRGCPARKQVQRVDEDPSSFRITYSGHHTCNVPHNIPPLNRNSVDKSVTESNYMGKHTDPNSYWDGEFARGSIKYYRL* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1793 638 ProSiteProfiles WRKY domain profile. 527 593 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1793 638 PANTHER - 3 453 - -
Dod08g1793 638 PANTHER PROTEIN LAP1-LIKE 3 453 - -
Dod08g1793 638 SUPERFAMILY L domain-like 3 421 - -
Dod08g1793 638 Gene3D WRKY domain 514 594 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1793 638 SMART LRR_typ_2 25 48 IPR003591 -
Dod08g1793 638 SMART LRR_typ_2 72 95 IPR003591 -
Dod08g1793 638 Pfam WRKY DNA -binding domain 528 591 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1793 638 Pfam Leucine rich repeat 2 59 IPR001611 GO:0005515
Dod08g1793 638 SUPERFAMILY WRKY DNA-binding domain 526 593 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1793 638 Gene3D Ribonuclease Inhibitor 1 189 IPR032675 -
Dod08g1793 638 Gene3D Ribonuclease Inhibitor 200 433 IPR032675 -
Dod08g1793 638 SMART WRKY_cls 527 592 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1793 Dod-Chr8 42434850 42445934 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1793 506 597 WRKY Transcription Factor Family AT3G56400 48.936 3.66e-21 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g1793 WRKY 1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1793 - - aip:107622712 814.683