Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1792 ATGGGGTACCTCAATTCAGTTTTGTCATCTTCGAGTCAGGTTCATGCAGCAGAAGATTCACCTGTGAGTGGAGGGGGACTCAGATGCACAACTGTTGTATACGTCAGAATGGCAAGTTCAGCTATGGGTATGCTAGCTCTCCAGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGCGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGCTCGATGCTGCTGAGTATGTGAAACAACACCTATTTAGTAATTTGATCAGACACCCGAAATTCATTTCCGACACCAAATCTGCGATAGCTGATGCATATAACCACACCGACTCTGAGTTTCTGAAATCAGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTAGTTGGTGACCGTTTGCTTGTTGCTAACGTTGGGGACTCCAGAGCTGTTATATGCCGGGGTGGAAATGCCGTTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGACGAGAGGCAAAGGATTGAACAAGCTGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTCGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAGGTGGATAGCTCTCTCGAGTTTCTTATATTGGCCAGCGATGGGCTATGGGATGTTGTCTCAAACGAGGAGGCCGTCACCATGATAAAACCAATAGAGGACGCAGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGCAGTTCTGACAACATTACTTGCGTGGTCGTTCGATTCTTGATGACCCAAGGTGCTTCTTCTCGCGGTGGCTCCGGCTAA 903 0.4673 MGYLNSVLSSSSQVHAAEDSPVSGGGLRCTTVVYVRMASSAMGMLALQARDLQWKIFMRQELMVLMAKSLAFSEFLMVMVVLDAAEYVKQHLFSNLIRHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAVAVSRDHKPDQTDERQRIEQAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVTMIKPIEDAEEAAKRLMQEAYQRGSSDNITCVVVRFLMTQGASSRGGSG* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1792 300 PANTHER ALPHABET, ISOFORM E-RELATED 3 296 - -
Dod08g1792 300 SUPERFAMILY PP2C-like 83 287 IPR036457 -
Dod08g1792 300 SMART PP2C_SIG_2 58 287 IPR001932 -
Dod08g1792 300 CDD PP2Cc 83 287 IPR001932 -
Dod08g1792 300 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 296 - -
Dod08g1792 300 ProSiteProfiles PPM-type phosphatase domain profile. 41 287 IPR001932 -
Dod08g1792 300 Pfam Protein phosphatase 2C 71 280 IPR001932 -
Dod08g1792 300 SMART PP2C_4 35 285 IPR001932 -
Dod08g1792 300 Gene3D - 81 291 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1792 Dod-Chr8 42422686 42429111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1792 1 291 PP2C-type Phosphatase Gene Family AT4G31750 74.411 1.23e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1792 K17506 - gmx:100795017 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1792 08 42422686 42429111 Dod08g1792 08 42422686 42429111 ECH