Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1779 ATGCTCACCTTTTCCCCTTCAATAATAGGTCACTCCCTATACATCAATATAACTAGTTTCAATAATGTTAATAGTGCAACCAAAAACAAGGCATATGAAGGTGATGCCATGCCTCTCATGGGGTCCATAGAGCTCAACACAAATGACTTCTATAGAGTTGGTCGTGCCACCTATAACCAACCTTTGCACCTTTGGGACAAATCCACAAAAGTCCTCACAGATTTCACAACCCATTTCTCATTCACTATTGATAAATCCAATGACACTATCCATGCTAAAGGATTTGCATTTTACATGGCTCCATTTGGTTACCAAATTCCATCGAATTTAGCTGGTGGCAATCTTGGACTATTCAACAATACCACAAAATATGGTTCACCCCAAAACAATATTTTTGTGGTAGAATTTGATACATACAGAAATTTTGAGTACGATCCACCAGGGAGTCATGTTGACATCAACAATAACTCCCTTAAATCAATCACTTATGCTGATTTGGATATTGAAAACAATAATGGGAAACAAGATTCTAAGGTGGCCATTGATCTGGACAAAGCATCTATCCCTAGAAAATTTGATTACAAAGAATTGGTTGCAGCCACTAATGGATTCTCGGATGATAGAAGGTTGGGAAAAAGAGGGTCAGATCAAGTTTACAAAGGGGTTCTAAGCGATTTAGGTCGTGTGGTTGCTGTGAAAAGAATCTTTGCAAACTTTCAAAACTCGGAGAAAATATTCATCAATGAGAAAACTTTGGCATGGGATGTGAGGTATAAGATAGCATTAGGTATGGCTACAGCACTTCATTACCTTCATGAGGATGCAGAACAATGTGTTCTTCATAGAGATATTAAGTCAGCCAATGTTTTGTTGGACACATATTTCAGCACTAAGATTGGTGATTTTGGGATAGCCAAGTTGGTGGACCCAAGATTAAGGACTCAAAGGACAGGTGTTGTAGGGACATATGGTTACTTGGCACCGGAATATATGAATGGAGGGAGGGCTAGTAAAGAATCAGACATGTATAGTTTTGGGGTTGTAGCTTTGGAAATTGCATGTGGGAGGAGGACTTATTATGATGGGGAGTATCATGTTCCTCTAATGAATTGGGTTTGGAAACTCTATGTTGAAGGGAATGTTTTGAATGGTGTTGATGAGGGATTGAACAAGAAATTTGATGAACATCAAATGACATGCTTGCTTATTGTGGGACTATGGTGTACACACCCAAATGACAAGGAAAGGCCAAAGGCAGCCCAAGTGATTAAAGTTCTTCAACTTGAATCTGCACTACCTTTGCTTCCACATAATATGCATGATCATCACAATCTTCGACAAAGCATAGGAGAACCTCGATATTCCTTTCAATCAACACCTATCACTAGTAGCCTTGTTAATGATGGACGTTAA 1413 0.3892 MLTFSPSIIGHSLYINITSFNNVNSATKNKAYEGDAMPLMGSIELNTNDFYRVGRATYNQPLHLWDKSTKVLTDFTTHFSFTIDKSNDTIHAKGFAFYMAPFGYQIPSNLAGGNLGLFNNTTKYGSPQNNIFVVEFDTYRNFEYDPPGSHVDINNNSLKSITYADLDIENNNGKQDSKVAIDLDKASIPRKFDYKELVAATNGFSDDRRLGKRGSDQVYKGVLSDLGRVVAVKRIFANFQNSEKIFINEKTLAWDVRYKIALGMATALHYLHEDAEQCVLHRDIKSANVLLDTYFSTKIGDFGIAKLVDPRLRTQRTGVVGTYGYLAPEYMNGGRASKESDMYSFGVVALEIACGRRTYYDGEYHVPLMNWVWKLYVEGNVLNGVDEGLNKKFDEHQMTCLLIVGLWCTHPNDKERPKAAQVIKVLQLESALPLLPHNMHDHHNLRQSIGEPRYSFQSTPITSSLVNDGR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1779 470 PANTHER - 18 181 - -
Dod08g1779 470 PANTHER - 251 442 - -
Dod08g1779 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Dod08g1779 470 PANTHER PUTATIVE-RELATED 181 250 - -
Dod08g1779 470 ProSiteProfiles Protein kinase domain profile. 104 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1779 470 CDD lectin_legume_LecRK_Arcelin_ConA 19 175 IPR001220 GO:0030246
Dod08g1779 470 Pfam Protein kinase domain 250 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1779 470 PANTHER - 181 250 - -
Dod08g1779 470 Gene3D - 16 245 - -
Dod08g1779 470 PANTHER PUTATIVE-RELATED 18 181 - -
Dod08g1779 470 PANTHER PUTATIVE-RELATED 251 442 - -
Dod08g1779 470 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 172 IPR013320 -
Dod08g1779 470 SMART serkin_6 204 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1779 470 Pfam Legume lectin domain 18 184 IPR001220 GO:0030246
Dod08g1779 470 SUPERFAMILY Protein kinase-like (PK-like) 188 439 IPR011009 -
Dod08g1779 470 Gene3D Transferase(Phosphotransferase) domain 1 246 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1779 Dod-Chr8 42274054 42275986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1779 182 439 Receptor kinase-like Gene Family AT5G10530 43.831 8.15e-79 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod08g1779 Pkinase 8.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1779 - - gmx:100784490 420.624