Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1778 ATGGCTGCTTCACCACCTTGTCTTCACTTCCTCAATATCACACCTTTCTTTTTGCATTTTCTTCTTTTGCTCACTACCCTTTCTTCCTTTCCAATTGTTCAGCCACTATCATTCAACATAACCAATTTTGATGACCCTTCGAGCAACATAGCATATGAAGGTGATGCTAGATCCACCAATGGATCCATAGACCTCAACAAAGTTAGCTATTACTTCAGGGTTGGTCGTGCCATATATGGCCAACCCCTTCACGTTTGGGACTCATCTACCAATGTTCTCACAGACTTCTCCACCAGTTTCTCATTCACTATTGATAAAGTGAATGACACCACAATTGGTGATGGCTTTGTCTTCTATATGGCCCCTCTTGGCTACCAAATCCCACCAAACTCAGCTGGTGGCACTTTTGGACTATTCAATGCCACCACCAATAGCATCAACCAACCTCATAACCATGTGGTTGCAGTTGAGTTTGACACATTCGTAGGCTCCATTGATCCACCAGTGCAGCATGTGGGGATTGATGACAACTCTTTAATATCAGTTGCTTATGCCAAGTTTGATATTGGCAAAAATCTTGGGACATGTTTTGCTCTGATAACTTATGATGGTTCGACCAAGACACTGCAAGTGTCCTGGTCCTTTAATAGAAGCGGCCTTACCGCTTCCATATCAAATGGTTCTTCTAATTTTTTGTCTTACCATATTGACCTCATGCAAGCTCTGCCCGAGTGGGTGAATGTTGGATTCTCGGCTTCAACCGGCTTGTCCACGGAGCAAAATGTTATTCACTCGTGGGAATTTCATTCAACTTTGAGTTCCATAGGGGTAAATGGAGAGAAAAAGAAGTTGAACATTGTTGTAGTTGTTGTTCCGGCGATTGTTTCAATTTGTTTTGTGATTGTGGTAGTGATTGTTGGTTGGTTAATGATCAAGAAGAGGAGGAGCAGTGCTAATGATGGCGAAAACCCCGGACTTTCCTCGGTGGAGTTTGATCTGGATAAAGCAACCATCCCTAGAAGATTTGATTACAAAGAGTTGGTTGCAGCCACCAATGGTTTTGCAGATGATAAAAGGCTTGGACAAGGAGGGTCTGGACAAGTTTTCAAAGGGGTCTTGAGCTATTTAGGAAGGGTAGTTGCTGTGAAAAGGATCTTTGCTGACTTTGAGAATTCAGAGAGAGTCTTCAACAATGAGGTGAGGATCATAAGCCGTCTTATCCATAAAAACCTGGTGCAATTCCTAGGTTGGTGCCATGAGCAAGGGGAATTGTTACTAGTTTTTGAGTACATGCCTAATGGAAGCCTTGACACTCATCTATTTGGGAACAAAAAGACTTTGGCATGGAATTTAAGGTACAAGATAGCACTAGGTGTGGCCACAGCACTTCATTATCTTCATGAAGATGCAGAACAGTGTGTGCTTCATAGAGATATTAAGTCAGCTAATGTTTTGTTGGACACAGATTTTAGCACTAAGCTGGGTGATTTTGGGATGGCAAAGTTGGTGGACCCCAGATTGAGGACTCAAAGGACAGGAGTGGTTGGTACATACGGTTACCTGGCCCCAGAATACATCAATGGAGGAAGGGCTAGTAAGGAATCAGACATGTATAGTTTTGGGGTTGTGGCACTGGAAATTGCAAGTGGGAGGAGGACTTTTAGGGATGGAGAATTTCATGTGCCACTAACAAATTGGATATGGCAACTTTATGGGGAAGGGAATCTTATGAATGCTGCTGATGAGAGGTTGAGTAAGGAGTTTAATGAAAATGAAATGATGAGCTTGCTTACTGTGGGACTATGGTGTACTCACCCTGATACAAAGGAAAGGCCAAAGGCAGCACAAGTAATTAAGGTTCTTCAGCTTGAAGCCCCATTACCAGTGTTACCAAATGATATGCATGTTCTTCCTACCCCTTCAACTATTGTGCAACCCAATTATTCCTTATCACCAGCCATTTCTACTAGCCTTGTTCATGGTGGACGTTAA 1992 0.4277 MAASPPCLHFLNITPFFLHFLLLLTTLSSFPIVQPLSFNITNFDDPSSNIAYEGDARSTNGSIDLNKVSYYFRVGRAIYGQPLHVWDSSTNVLTDFSTSFSFTIDKVNDTTIGDGFVFYMAPLGYQIPPNSAGGTFGLFNATTNSINQPHNHVVAVEFDTFVGSIDPPVQHVGIDDNSLISVAYAKFDIGKNLGTCFALITYDGSTKTLQVSWSFNRSGLTASISNGSSNFLSYHIDLMQALPEWVNVGFSASTGLSTEQNVIHSWEFHSTLSSIGVNGEKKKLNIVVVVVPAIVSICFVIVVVIVGWLMIKKRRSSANDGENPGLSSVEFDLDKATIPRRFDYKELVAATNGFADDKRLGQGGSGQVFKGVLSYLGRVVAVKRIFADFENSERVFNNEVRIISRLIHKNLVQFLGWCHEQGELLLVFEYMPNGSLDTHLFGNKKTLAWNLRYKIALGVATALHYLHEDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYINGGRASKESDMYSFGVVALEIASGRRTFRDGEFHVPLTNWIWQLYGEGNLMNAADERLSKEFNENEMMSLLTVGLWCTHPDTKERPKAAQVIKVLQLEAPLPVLPNDMHVLPTPSTIVQPNYSLSPAISTSLVHGGR* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1778 663 Gene3D Transferase(Phosphotransferase) domain 1 431 626 - -
Dod08g1778 663 CDD lectin_legume_LecRK_Arcelin_ConA 36 272 IPR001220 GO:0030246
Dod08g1778 663 PANTHER - 30 636 - -
Dod08g1778 663 CDD STKc_IRAK 360 622 - -
Dod08g1778 663 Gene3D Phosphorylase Kinase; domain 1 339 430 - -
Dod08g1778 663 SMART serkin_6 354 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1778 663 ProSitePatterns Legume lectins beta-chain signature. 154 160 IPR019825 -
Dod08g1778 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 272 IPR013320 -
Dod08g1778 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Dod08g1778 663 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Dod08g1778 663 Pfam Legume lectin domain 36 271 IPR001220 GO:0030246
Dod08g1778 663 PANTHER PUTATIVE-RELATED 30 636 - -
Dod08g1778 663 ProSitePatterns Legume lectins alpha-chain signature. 242 251 IPR000985 -
Dod08g1778 663 ProSiteProfiles Protein kinase domain profile. 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1778 663 Gene3D - 34 286 - -
Dod08g1778 663 Pfam Protein kinase domain 355 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1778 663 SUPERFAMILY Protein kinase-like (PK-like) 338 642 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1778 Dod-Chr8 42255435 42257426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1778 21 636 Receptor kinase-like Gene Family AT5G10530 46.939 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod08g1778 Pkinase 8.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1778 - - vun:114193012 868.996