Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1754 ATGGATGAAAAGGTGGAAACTCTACAAGTGGAGCTACAACGTTTGAAAGAGGAGAACAGTGCTCTAAGACTGATGCTTGAGGTTCTGAGCAGCAAATACAAAAGCCTTCAGTCCCAGCTTCAAGAGATCAACAAGGCAGAACAGCTTGTCATCAATTCAAACCAAAGTGGGTCAGTATCATCAGTGCCTATCATTGATGCAACAAACAAGAGACCAAGACTAGAGTTTCCCACATCTAAAAAGCCATTGCAAATCTTTGTCAGAACCCAACCCAAGGATGATAGTTTGATAATAAAAGATGGATATCAATGGAGGAAGTATGGGCAGAAGGTTACCAAAGACAATGCTTCACCTAGAGCTTACTTCAGGTGTTCCATGGCTCCCAGCTGCCCAGCCAAGAAGAAGGTGCAAAGATGCATACATGACAAGTCTATCCTTGTTGCAAGTTATGATGGAGAGCACAACCATGGTGCACTTTATGACTCATTCATACCATCTTCCTCCACTCCAAAAGGCTCGGTGGCTAATAATTTACCTCTTACAATCACACCAAACGACCAATTAGAAGCAATGAACATTGACCATGCTCTTTCTGGTTGGCTTCAAAAGGATTCAAGACTTAGTGAGGATGATGTTATGCAACAAAGTGACCATAGAGGCAACATCAAAGTTGAAGAATATGCAAGCTCCCTTATCAAAGACCCTGAATTCACTGCAGCATTAGCTGAAGCCGTTGCCAGGACCATCACTGGCCAGCATAAGCAACAAGGCCTAAACCTCAACTTGGGTCTTCCAGAAGAGTGA 804 0.4328 MDEKVETLQVELQRLKEENSALRLMLEVLSSKYKSLQSQLQEINKAEQLVINSNQSGSVSSVPIIDATNKRPRLEFPTSKKPLQIFVRTQPKDDSLIIKDGYQWRKYGQKVTKDNASPRAYFRCSMAPSCPAKKKVQRCIHDKSILVASYDGEHNHGALYDSFIPSSSTPKGSVANNLPLTITPNDQLEAMNIDHALSGWLQKDSRLSEDDVMQQSDHRGNIKVEEYASSLIKDPEFTAALAEAVARTITGQHKQQGLNLNLGLPEE* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1754 267 Coils Coil 5 46 - -
Dod08g1754 267 SUPERFAMILY WRKY DNA-binding domain 94 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1754 267 PANTHER WRKY TRANSCRIPTION FACTOR 49 2 249 - -
Dod08g1754 267 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 249 IPR044810 GO:0003700
Dod08g1754 267 SMART WRKY_cls 98 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1754 267 Pfam WRKY DNA -binding domain 99 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1754 267 Gene3D WRKY domain 84 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1754 267 ProSiteProfiles WRKY domain profile. 93 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1754 Dod-Chr8 41782062 41784843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1754 2 256 WRKY Transcription Factor Family AT1G80840 37.329 2.88e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g1754 WRKY 4.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1754 - - ccaj:109791737 371.703