Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1753 ATGGAATCCACATGCGAGGATACTTCACTCAATCTTAATCTCGTTCCTCCGCAGCAAATGGACGTTGTGGGTGAAGTTTTGGAGGAAGAGTTGCATCGTCTAAGTTGTGAGAATAAGAGGCTAAGTGAGACGCTGACACGCATGTGTGAGAGCTATCAGGCTATGCAAAAGCATTTGATCAAATTGACGAACACGGATCATGAAAGAGACCCAATTACACCATCAAGGAAGAGGAAAGCTGAGAGTGACAATTGTGCCAATATTTTTGGTGTTTTAGGCAATTGCAATTATAATAATATTATTAACACTACTGAGAGTAGCACAAGCACTCTTGAGGAGGAGTCATTCAAAAGGCACAAGGATATCGCATCGCTTAATAAGGTTTCCAAGGTTCTTGTGAAGACGGAAGCTTCTGATCCCAGCTTGTATGTCATGGATGGATATCAGTGGAGGAAATATGGTCAAAAGGTCACCAGAGATAACCCTTCTCCAAGGGCTTACTTCAAGTGCTCCTTTGCCCCAAGCTGTCCAGTGAAAAAGAAGGTGCAAAGAAGTGTAGAAGACCCCACTATACTTGTTGCAACTTATGAAGGGGAGCACAACCATGGTCATCACCGAGCTGAAATGTCACTAATCTCAAGCCAAAGGGAAACCCCTTTAGTTTCTGTTCCTGTCGCCTCACCTACCTCAATTATTCCAAGCGCTGGCCCAACTATAACGCTTGACTTGGTCAAGTCAGCATCTGTTGACGATGCACAAAAGTCTTCTATCCAGCAATTTTTGGTTCAACAGATGGCTACTTCATTGACAAGAGATCCTAATTTCACGGCAGCACTTGCCAGGGCCATTTCGGGAAGAATTCTAGACCAGACTTATGTGGAAAAATTGTGA 891 0.4366 MESTCEDTSLNLNLVPPQQMDVVGEVLEEELHRLSCENKRLSETLTRMCESYQAMQKHLIKLTNTDHERDPITPSRKRKAESDNCANIFGVLGNCNYNNIINTTESSTSTLEEESFKRHKDIASLNKVSKVLVKTEASDPSLYVMDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPTILVATYEGEHNHGHHRAEMSLISSQRETPLVSVPVASPTSIIPSAGPTITLDLVKSASVDDAQKSSIQQFLVQQMATSLTRDPNFTAALARAISGRILDQTYVEKL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1753 296 Gene3D WRKY domain 127 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1753 296 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 292 - -
Dod08g1753 296 SUPERFAMILY WRKY DNA-binding domain 143 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1753 296 Coils Coil 24 44 - -
Dod08g1753 296 ProSiteProfiles WRKY domain profile. 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1753 296 SMART WRKY_cls 144 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1753 296 Pfam WRKY DNA -binding domain 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1753 296 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 292 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1753 Dod-Chr8 41745377 41747511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1753 3 295 WRKY Transcription Factor Family AT1G80840 43.653 3.10e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g1753 WRKY 2.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1753 - - gmx:100810978 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1753 08 41745377 41747511 Dod09g1862 09 40261955 40264273 PCT