Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1750 ATGGAATCCACATGCGAGGATACTTCACTCAATCTTAATCTTGTTCCTCCGCAGCAAATGGACGATGTGGGTGAAGTTTTGGAGGAAGAGTTGCATCGTCTAAGTTGTGAGAATAAGAGGCTAAGTGAGACGCTGACACGCATGTGTGAGAGCTATCAGGCTATGCAAAAGCATTTGATCAAATTGATGAACACGGATCATGAAAGAGACCCAATTACACCATCAAGGAAGAGGAAAGCTGAGAGTGACAATTGTGCCAATATTTTTGGTGTTTTAGGCAATTGCAATTATAATAATATTATTAACACTACTGAGAGTAGCACAAGTACTCTTGAGGAGGAGTCATTCAAAAGGCACAAGGATATCGCATCACTTAATAAGGTTTCCAAGGTTCTTGTGAAGACGGAAGCTTCTGATCCCAGCTTGTATGTCATGGATGGATATCAGTGGAGGAAATATGGTCAAAAGGTCACCAGAGATAACCCTTCTCCAAGGGCTTACTTCAAGTGCTCCTTTGCCCCAAGCTGTCCAGTGAAAAAGAAGGTGCAAAGAAGTGTAGAAGACCCCACTATACTTGTTGCAACTTATGAAGGGGAGCACAACCATGGTCATCACCGAGCTGAAATGTCACTAATCTCAAGCCAAAGGGAAACCCCTTTAGTTTCTGTTCCTGTCGCCTCACCTACCTCAATTATTCCAAGCACTTGCCCAACTATAACGCTTGACTTGGTCAAGTCAGCATCTATTGACGATGCACAAAAGTCTTCTATCCAGCAATTTTTGGTTCAACAGATGGCTACTTCCTTGACAAGAGATCCTAATTTCACGGCAGCACTTGCCAGGGCCATTTCGGGAAGAATTCTAGACCAGACTTATGGGGAAAAATTGTGA 891 0.431 MESTCEDTSLNLNLVPPQQMDDVGEVLEEELHRLSCENKRLSETLTRMCESYQAMQKHLIKLMNTDHERDPITPSRKRKAESDNCANIFGVLGNCNYNNIINTTESSTSTLEEESFKRHKDIASLNKVSKVLVKTEASDPSLYVMDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPTILVATYEGEHNHGHHRAEMSLISSQRETPLVSVPVASPTSIIPSTCPTITLDLVKSASIDDAQKSSIQQFLVQQMATSLTRDPNFTAALARAISGRILDQTYGEKL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1750 296 Gene3D WRKY domain 127 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1750 296 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 292 IPR044810 GO:0003700
Dod08g1750 296 SUPERFAMILY WRKY DNA-binding domain 143 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g1750 296 Coils Coil 24 44 - -
Dod08g1750 296 Pfam WRKY DNA -binding domain 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1750 296 ProSiteProfiles WRKY domain profile. 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1750 296 SMART WRKY_cls 144 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g1750 296 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1750 Dod-Chr8 41586043 41588125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1750 3 295 WRKY Transcription Factor Family AT1G80840 46.032 3.62e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g1750 WRKY 2.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1750 - - gmx:100810978 331.643