Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1742 ATGGTCAACCACACCACTAGAGTTATGAAGAAGATTCTTGAATGCTACAATGGTTTTGAGGGCATAAAAATGGTAGTAAATGCTGGTGGTGGTCTTGGAATCAACATTAACTTGATCATTTCCAAATACCGTCCATATCCAGGGTGTCAATTTCGACTTGCCTCAGGAGTGGAACATGTCGGGGGAGACATGTTTGAAAGCAGTGCCAAAATGTGA 216 0.4213 MVNHTTRVMKKILECYNGFEGIKMVVNAGGGLGININLIISKYRPYPGCQFRLASGVEHVGGDMFESSAKM* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1742 71 Gene3D Vaccinia Virus protein VP39 5 67 IPR029063 -
Dod08g1742 71 PANTHER O-METHYLTRANSFERASE COMT-TYPE, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 67 - -
Dod08g1742 71 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 66 IPR029063 -
Dod08g1742 71 PANTHER O-METHYLTRANSFERASE 1 67 IPR016461 GO:0008168
Dod08g1742 71 Pfam O-methyltransferase domain 2 58 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1742 Dod-Chr8 41358680 41359046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1742 1 70 Monolignol Biosynthesis Gene Families AT5G54160 48.101 2.55e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1742 K13066 - gmx:100803633 86.2705