Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1739 ATGTCAGAAAGCATGAGTATTTCTGTGAATGGACAATGTCGAGTCCCTCCAGGCTTCCGGTTTCATCCAACAGAAGAGGAGTTGTTGCTGTACTACTTGAGGAAGAAGGTCTCCTCTGAGAAAATTGACCTCGATGTGATTCGCGATGTTGATCTCAACAAGCTCGAGCCATGGGACATACAAGAACATTGCAAAATAGGAAGCACCCCACAAAATGATTGGTACTTGTTCAGCCACAAAGACAAGAAGTATCCCACAGGAACAAGAACCAACCGCGCTACAGCTTCAGGGTTCTGGAAAGCCACTGGGCGCGACAAACAGATATACAGAAACGGGAAGAGGATTGGAATGAGAAAGACTTTGGTTTTCTACAAAGGTCGAGCCCCCCACGGCCAAAAATCTGAATGGATCATGCATGAATACAGGCTAGATGACACTACTAGCGCCAGCGACACCAATTTCGTGTCCAGTAATTATGTGATGGGAGATGCAACCCATGAAGAAGGGTGGGTAGTATGTAGAACATACAAGAAGAAGAACTATCTCAAGGGCATAGAAAGCCCCTTAGCCTCCTCGTCCATCACTGAGGAAACCGGAAGAAGCCACTTGTATGATTCTTGTGACGAGGGAGCTAATTTGGAGCAAATACTTCACCAAAGGGGAAGAGTTAGCAAGGAAGAGAATCACGAAGAAGCCGGTGATTACAACAATGGAAGGTTTGCCAACAATAATAATAATAATAACAAGAGTGGGCCCATTATTCCGGAAAAGATATTGGCCATAGGCAACGAAGAAGGCTCATTCACCAACTGGGCAACCATGGATCGGATGGTTGCATTCCAGCTGAATGGGGAAAGTGACGAAGGTTCTAGACAATTGGCTTGCTTCAATCATGACCTTCATCAGCATGGGCTATTATTGCACTGGGGCTAG 933 0.4577 MSESMSISVNGQCRVPPGFRFHPTEEELLLYYLRKKVSSEKIDLDVIRDVDLNKLEPWDIQEHCKIGSTPQNDWYLFSHKDKKYPTGTRTNRATASGFWKATGRDKQIYRNGKRIGMRKTLVFYKGRAPHGQKSEWIMHEYRLDDTTSASDTNFVSSNYVMGDATHEEGWVVCRTYKKKNYLKGIESPLASSSITEETGRSHLYDSCDEGANLEQILHQRGRVSKEENHEEAGDYNNGRFANNNNNNNKSGPIIPEKILAIGNEEGSFTNWATMDRMVAFQLNGESDEGSRQLACFNHDLHQHGLLLHWG* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1739 310 Gene3D NAC domain 24 183 IPR036093 GO:0003677|GO:0006355
Dod08g1739 310 ProSiteProfiles NAC domain profile. 15 178 IPR003441 GO:0003677|GO:0006355
Dod08g1739 310 MobiDBLite consensus disorder prediction 221 248 - -
Dod08g1739 310 SUPERFAMILY NAC domain 9 178 IPR036093 GO:0003677|GO:0006355
Dod08g1739 310 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 8 202 - -
Dod08g1739 310 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Dod08g1739 310 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1739 Dod-Chr8 41310234 41311820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1739 1 286 NAC Transcription Factor Family AT2G46770 61.149 1.68e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod08g1739 NAM 2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1739 - - aprc:113863517 383.645