Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1738 ATGGGGAAGTCATGGTTGACTGCTGTGAAAAGGGCATTCAGATCTCCAAACAAGGACACACACAAAAAGAGTAAAACAAGAGACGATCCTGAACAGGAAGGCCAAGACCAAGACAAGAAGAGAGACAGAAGAAGATGGATTTTCAGAAAACCCACAAACCAGGAAACACTAGTCAGTACTCAAATGAAGGTGAAGCCTTCTTCAGCCGCAGACCAGGCTGTGTCTGTGGTGGCAGTAGCCGCAACGACAGATCAAAAGCATTCAGTTGCTGTGGCAGTGGTCACCACACAGGCTCCTATGGAGGCGGCAAGGCTCAACAATCATGGTATTGGCAGGGATGGGAAGCAAGACGCTGCTATTGTGATTCAAACTGCTTTCAGAGGATATCTAGCAAGAAGAGCGCTTCGTGCGCTAAAGGGGCTGGTGAAGTTGCAAGCGTTGGTAAGGGGACACAATGTTCGGAAGCAGGCAAAGATGACCCTTCGGTGCATGCAGGCTCTTGTTCGGCTACAATCTAGGGTGCTTGACAACCGCACAAGGTCCTCACACGAAGGTGGTAGTTCTAGCAGAACATCCGCTTTCAGCAAAACCAATAGCCTCTGGGAATCTCCCTATCTTCAGGGCATCTCAGATAGGAAGTCACTCTCAAGAGAGGGAAGCAGCATTGCAAGCGACTGGGATGAACGCCCACACACAGTTGAAGAAGTTAAAGCCATGTTGCACAAGAGGAGAGAAGCAGCAGCTATGAAGCGAGACAGGTCCCTGTCTCAAGCCTTTTCTCAACAGATTTGGAGGAATGGCAACGAAGATGAGTTAGAAGAGAGACCAAAACGGTTGGAGCGGTGTATGACTATGAAGCCATGGGAAAGCAACAGGGGAAGAGCCTCAACAGATCGTAGAGACCCCATTAGGACTGTGGAAATTGACACCTCCCAGCCATACTCATATTTAGGACCTAACTACCGAAGATCACATCCAAACTACCAATATAATCCACAGACACAGAGCCATTCAATTGCATCCCCACACCACAGAACCAACCAAAATGTATCGATTCAGCACTCCCCTGCAACCCCATCGCCAGCAAAATCAAGACCCATTCAAGTCCGGTCCGCGAGCCCACGCTCTAGCAGAGAAGATAGAAGCTACCATACATCTCAAACACCGAACCTGAGGCTGAATAACCATAATAATAATAATAATCATCATAATTATAGTGGAAACGTGTGGCTAAGTAGCATGGCAGGAACAAGTAGTAATGGTGGGGCTAGTTTGCCTAATTACATGGCTGCAACGGAGTCAGCAAAGGCTCGTATTCGGTCGCAGAGTGCCCCGAGGCAGAGGCCACCGACGCCAGAGAGGGACAGAGTTGGGTCAACGAGGAAAAGACTGTCATATCCTGCACATAATATTGTGGGAATGGGGTATGGGCATAGTTTAAGGAGTCCAAGCTTCAGGAGTGTGAGTGGATCACATTTTGGGCTGGAGCACCAGTCCAACTACTCTTCCTGCTGCACTGACAGTCTTGCCGGTGAGATTTCTCCTTCTTCAACTGGTGACCTTAGAAGGTGGTTGAGATGA 1581 0.4877 MGKSWLTAVKRAFRSPNKDTHKKSKTRDDPEQEGQDQDKKRDRRRWIFRKPTNQETLVSTQMKVKPSSAADQAVSVVAVAATTDQKHSVAVAVVTTQAPMEAARLNNHGIGRDGKQDAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRLQSRVLDNRTRSSHEGGSSSRTSAFSKTNSLWESPYLQGISDRKSLSREGSSIASDWDERPHTVEEVKAMLHKRREAAAMKRDRSLSQAFSQQIWRNGNEDELEERPKRLERCMTMKPWESNRGRASTDRRDPIRTVEIDTSQPYSYLGPNYRRSHPNYQYNPQTQSHSIASPHHRTNQNVSIQHSPATPSPAKSRPIQVRSASPRSSREDRSYHTSQTPNLRLNNHNNNNNHHNYSGNVWLSSMAGTSSNGGASLPNYMAATESAKARIRSQSAPRQRPPTPERDRVGSTRKRLSYPAHNIVGMGYGHSLRSPSFRSVSGSHFGLEHQSNYSSCCTDSLAGEISPSSTGDLRRWLR* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1738 526 MobiDBLite consensus disorder prediction 507 526 - -
Dod08g1738 526 Gene3D - 112 166 - -
Dod08g1738 526 SMART iq_5 114 136 IPR000048 GO:0005515
Dod08g1738 526 SMART iq_5 137 158 IPR000048 GO:0005515
Dod08g1738 526 Pfam IQ calmodulin-binding motif 142 158 IPR000048 GO:0005515
Dod08g1738 526 Pfam IQ calmodulin-binding motif 117 136 IPR000048 GO:0005515
Dod08g1738 526 MobiDBLite consensus disorder prediction 383 405 - -
Dod08g1738 526 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Dod08g1738 526 Pfam Protein of unknown function (DUF4005) 373 477 IPR025064 -
Dod08g1738 526 PANTHER IQ-DOMAIN 5-RELATED 3 526 - -
Dod08g1738 526 MobiDBLite consensus disorder prediction 19 43 - -
Dod08g1738 526 MobiDBLite consensus disorder prediction 286 306 - -
Dod08g1738 526 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Dod08g1738 526 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 3 526 - -
Dod08g1738 526 MobiDBLite consensus disorder prediction 286 405 - -
Dod08g1738 526 MobiDBLite consensus disorder prediction 438 460 - -
Dod08g1738 526 MobiDBLite consensus disorder prediction 308 373 - -
Dod08g1738 526 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1738 Dod-Chr8 41287641 41289754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1738 5 526 IQD Protein Family AT4G00820 52.813 3.20e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1738 - - gmx:100786729 643.269