Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1733 ATGACAAACTGTCACCGCAACAACGTCGGCTCCCTCGTTCTCGGCCACCACCCTAACAAGTCCTCCGCCTTCGCTGGCAACCACTTCCGCCTATGGAACTCCCTCTCCGCCGCGTCCTTCCGCCGGATCCTCTTCGACGCCCTCAGCTGTGGCGGCGCCACCATTCGCCGCCACCACACCGACTCCGTCTCCAACTCCGCCGCCTCCGACATATCCGACAACCCGAAGCCGAAGCCTAAGCGCAATGCGAGGTCGGAGAAGCTCTCTGATCTCCTGAGCATGGCGGAGTCGGAAGGGGAATCGGAGACAAAGAAGAAGGAGGAGGCTCTAGAGGACCTCAAGCGAATCGTGGCGGAGCTTTGTTCGGCGGCGGAGGATTCTCCGGCAGCGAGGCGAGCGTCGGCCACCGCAGCCTCCGCCATGAGGAGGCTGGCGAGGGAGGACTCGGAAGTTAGAGTGACGCTCGCGATGCTCGGAGCGATCCCTCCTCTCGTCGCCATGCTGGATTCTGAAGACCTCGACTCTCAGGTCGCTTCGCTCTACGCGTTGCTCAACCTCGGAATCGGAAACGATGCAAATAAAGCGGCCATTGTGAAGGTTGGGGCTGTTCACAAGATGCTGAAGCTTATTGAATCTCCAGATTCTGTGGATTCATCGGTTTCTGAAGCAATTGTTGCAAATTTTCTTGGACTGAGTGCTCTGGATTCCAACAAACCAATAATTGGGTCCTCTGCTGCAGTGCCATTCCTAGTGAGAACCCTTCAGAATTTAGATAATAGAACAAGCCCCCAAGCCAAGCAAGATGCTCTCAGAGCATTGTACAATCTCTCAATCTTCCCAGCCAATGTTTCATTTATTTTGGAAACCGATTTGGTCCCATTTCTGATAAACTCAATTGGGGATATGGCAGTGACTGAAAGAACAATTGCAATTCTAAGCAACTTGGTGTCGACTCGCGAGGGTAGGAAAGCCATCAGTGCTGTGCCTGATGCTTTCCCTATCCTGGTGGATGTGTTGAACTGGACAGATTCACCGCAATGCCAAGAAAAGGTATGCTATGTTTTGATGGTAATGGCACACAAGTCCTATGGTGACAGGCAGGCCATGATTGAGGCAGGGATTGCATCATCACTGCTTGAGTTGTCGCTTCTCGGCACCACATTGGCACAGAAGAGGGCCTCAAGGATATTGGAGGGTTTGAGGGTGGACAAAGGGAAGCATGTCTCCGGCAACTTCGGTGGAAATCTAGGCGCAACCGTCTCCGCCCCGATTTGCGGCTCTTCATCGTCTTGTGCGAAGACAGATGGAGGAGGAAAGGAGGGTTCAGATGGGGAGGAAGATATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAGTTAGTCCAGCAGAGTTTGCAAAACAACATGAGGAAGATTGTAAAGAGGGCCAATTTACCTCAAGATATCGTTCCCTCGGATCATTTCAAGTCACTCACTACAAGTTCGACTTCGAAGAGCCTGCCATTTTGA 1506 0.5266 MTNCHRNNVGSLVLGHHPNKSSAFAGNHFRLWNSLSAASFRRILFDALSCGGATIRRHHTDSVSNSAASDISDNPKPKPKRNARSEKLSDLLSMAESEGESETKKKEEALEDLKRIVAELCSAAEDSPAARRASATAASAMRRLAREDSEVRVTLAMLGAIPPLVAMLDSEDLDSQVASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPDSVDSSVSEAIVANFLGLSALDSNKPIIGSSAAVPFLVRTLQNLDNRTSPQAKQDALRALYNLSIFPANVSFILETDLVPFLINSIGDMAVTERTIAILSNLVSTREGRKAISAVPDAFPILVDVLNWTDSPQCQEKVCYVLMVMAHKSYGDRQAMIEAGIASSLLELSLLGTTLAQKRASRILEGLRVDKGKHVSGNFGGNLGATVSAPICGSSSSCAKTDGGGKEGSDGEEDMMSEEKKAVKQLVQQSLQNNMRKIVKRANLPQDIVPSDHFKSLTTSSTSKSLPF* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1733 501 MobiDBLite consensus disorder prediction 438 454 - -
Dod08g1733 501 MobiDBLite consensus disorder prediction 430 456 - -
Dod08g1733 501 SUPERFAMILY ARM repeat 128 397 IPR016024 -
Dod08g1733 501 MobiDBLite consensus disorder prediction 59 107 - -
Dod08g1733 501 MobiDBLite consensus disorder prediction 482 501 - -
Dod08g1733 501 Pfam Armadillo/beta-catenin-like repeat 148 186 IPR000225 GO:0005515
Dod08g1733 501 Gene3D - 259 410 IPR011989 -
Dod08g1733 501 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 159 201 IPR000225 GO:0005515
Dod08g1733 501 MobiDBLite consensus disorder prediction 485 501 - -
Dod08g1733 501 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 501 - -
Dod08g1733 501 MobiDBLite consensus disorder prediction 74 107 - -
Dod08g1733 501 SMART arm_5 148 188 IPR000225 GO:0005515
Dod08g1733 501 SMART arm_5 279 317 IPR000225 GO:0005515
Dod08g1733 501 SMART arm_5 234 278 IPR000225 GO:0005515
Dod08g1733 501 SMART arm_5 190 233 IPR000225 GO:0005515
Dod08g1733 501 SMART arm_5 321 360 IPR000225 GO:0005515
Dod08g1733 501 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 501 - -
Dod08g1733 501 Gene3D - 81 258 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1733 Dod-Chr8 41218285 41221667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1733 141 404 U-box Gene Family AT1G67530 30.258 1.57e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1733 - - mtr:MTR_1g014420 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1733 08 41218285 41221667 Dod09g1858 09 40196605 40198317 PCT