Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1722 ATGGCCAGGCCACAACAGCGATACCGAGGCGTGAGACAAAGGCATTGGGGTTCTTGGGTCTCTGAGATTCGCCACCCTATATTGAAGACAAGGATATGGCTTGGTACCTTTGAAACGGCTGAGGATGCAGCTAGAGCCTATGATGAAGCAGCTAGGCTTATGTGTGGTGCAAGGGCAAGAACAAACTTCCCATTCGACCCCACTGTGTCTCAATCATCAACTTCAAAGCTTCTCTCAGCAACTTTGATTGCCAAATTACACAGGTGCTACATGGCTTCTGTGCAAATGACTAGACAACCTTTTCAAGAGCCTCAAAGGGTGCCTAATTCTGTGCCAAAGAATGTTTGCTCCAAAACCACAAGCAATGAATCTGTGAAGATTAATGAAAGTGATGCAATTTTGTCCCAAAAGAGACCACATGAGGAGCAAGGTTCAGAGGCCAATTGGGTTGTCAAGAAGGTGAAAGCAGAGGAGGGTGCTCCTCAGTTCAAGCCACTTGAGGAATATCACATAGAGCAAATGATTGAGGAGCTTCTTGATAGGTCTATGGACCTTTCCTCTGTCATTCCAAATTAG 576 0.4583 MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGARARTNFPFDPTVSQSSTSKLLSATLIAKLHRCYMASVQMTRQPFQEPQRVPNSVPKNVCSKTTSNESVKINESDAILSQKRPHEEQGSEANWVVKKVKAEEGAPQFKPLEEYHIEQMIEELLDRSMDLSSVIPN* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1722 191 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Dod08g1722 191 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 181 - -
Dod08g1722 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE 1 181 - -
Dod08g1722 191 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Dod08g1722 191 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Dod08g1722 191 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Dod08g1722 191 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Dod08g1722 191 MobiDBLite consensus disorder prediction 101 122 - -
Dod08g1722 191 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Dod08g1722 191 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Dod08g1722 191 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1722 Dod-Chr8 40977907 40979242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1722 1 190 AP2-EREBP Transcription Factor Family AT5G25190 58.462 5.07e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod08g1722 AP2 6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1722 - - gmx:100785918 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1722 08 40977907 40979242 Dod09g1850 09 40089511 40090836 PCT