Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1720 ATGAACCTTTTTCTTCTCATGCTTCTCCTTATTCTCCACGAACCCTTTTGGATTCTTGCCTCAATAGACCCTCTTGCTCCCTCACCTCAGGTCCAAACACCCTTTTCTCCAATTTCCACATCAATGGCTGCTTCATCCCCAGGTGTTCGGGTGGAGAATGAACAGCACCAAATGGATTCACACAAGAAAATGGTAATAGCCTTTGTTGTAGCCGGCACTGCAGTTGGTGCAGTCATTTTGTGTGTGTTATGCCTCTGGATTTATCATACAAAGCATTCACCAAAATCCAAAGGGAAAGGTGTTCAAAATTCAGGCCAAGATGTTGAGAAAGGACCATTTTTGCGTAAATTCAGGTCTATTAAGACAATTGGCAAGAAGGGTTGTGTTCCAATAATTGATTATAAGCAAATAGAGAAAGCCACAGGCAAATTCAGTGAAAGTAACATCTTGGGTGAGGGTGGTTTTGGACGTGTTTACAAGGCTCGGTTGGATGATAACTTGGAAGTTGCCGTCAAGAAACTGCACTGTGAAAGTCAGGATGCTGAGAGAGAATTTGAGAATGAGGTGGGTTTGTTAAGAAAAATTCAACACCCCAACATAATTTCTTTACTGGGTTGTAGCAATGAAGGTGATTCGAGGTTTATCATCTATGAATTGATGCAAAATGGATCATTGGAAACTCAATTACATGGAACGTCTCATGGCTCTGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACGCAGCAAGAGGATTAAAATATCTGCATGAGCGCTGTTACCCTCCAGTGATTCATAGAGATCTGAAACCTTCTAATATTCTTTTGGATGCAAACTTCAATGCCAAGCTCTCTGATTTTGGTCTTGCCATAACTGATGGGTCCCAAAACAAGAACAATATCAAGCTTTCAGGCACATTGGGGTACGTGGCCCCAGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGCGATGTCTATGCCTTTGGAGTTGTTCTTTTGGAGCTTCTATTAGGAAGGAAGCCTGTGGAGAAACTAGCACCAGCTCAGTGCCAATCTATTGTCACGTGGGCCATGCCCCAGCTCACAGACAGATCCAAGCTTCCAACCATTGTGGACCCTGTGATTAAGGATACAATGGATCTAAAGCACCTATACCAGGTTACTGCTGTGGCTGTGCTATGTGTACAACCAGAGCCAAGTTACCGCCCACTGATTGCAGATGTTCTCCACTCACTCATCCCTCTTGTCCCTGTTGAGCTTGGAGGAACACTGAGAGTTTCACAAGTGACACAGCAAGTCTTACCTGCTGATCAACCTGAGAATTCTAGTCAATGA 1341 0.4325 MNLFLLMLLLILHEPFWILASIDPLAPSPQVQTPFSPISTSMAASSPGVRVENEQHQMDSHKKMVIAFVVAGTAVGAVILCVLCLWIYHTKHSPKSKGKGVQNSGQDVEKGPFLRKFRSIKTIGKKGCVPIIDYKQIEKATGKFSESNILGEGGFGRVYKARLDDNLEVAVKKLHCESQDAEREFENEVGLLRKIQHPNIISLLGCSNEGDSRFIIYELMQNGSLETQLHGTSHGSALTWHMRMKIALDAARGLKYLHERCYPPVIHRDLKPSNILLDANFNAKLSDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPQLTDRSKLPTIVDPVIKDTMDLKHLYQVTAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLRVSQVTQQVLPADQPENSSQ* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1720 446 Gene3D Phosphorylase Kinase; domain 1 113 219 - -
Dod08g1720 446 SUPERFAMILY Protein kinase-like (PK-like) 126 414 IPR011009 -
Dod08g1720 446 Pfam Protein kinase domain 145 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1720 446 PANTHER BNAA04G14780D PROTEIN 30 438 - -
Dod08g1720 446 CDD STKc_IRAK 150 417 - -
Dod08g1720 446 Gene3D Transferase(Phosphotransferase) domain 1 220 419 - -
Dod08g1720 446 SMART serkin_6 144 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1720 446 ProSitePatterns Protein kinases ATP-binding region signature. 150 173 IPR017441 GO:0005524
Dod08g1720 446 PANTHER OS01G0750732 PROTEIN 30 438 - -
Dod08g1720 446 ProSiteProfiles Protein kinase domain profile. 144 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1720 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1720 Dod-Chr8 40925658 40930383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1720 28 360 Receptor kinase-like Gene Family AT1G80640 48.810 2.16e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Dod08g1720 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1720 - - gmx:100785380 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1720 08 40925658 40930383 Dod09g1848 09 40072795 40075763 PCT