Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1714 ATGGAAGAAGAAAACACGAAGTCGCAATGGTCCCTCCATGATTTCGAGATCGGTAAACCTCTCGGGAGAGGAAAATTCGGTAGAGTCTATGTCGCCAGAGAACTTAAGAGCAAATATGTGGTTGCATTGAAGGTTATATTCAAGGAACAACTTGAAAAGTACAGAATTCATCATCAGCTAAGGAGGGAGATGGAAATACAATCCAATCTTCTCCACCCAAACATACTGCGTCTATATGGTTGGTTTCATGATGCAGAGCGTGTTTTCTTGATTCTTGAGTATGCTCACAATGGTGAGCTTTACAAGGAGCTTAGAAAAAGAGGCCACTTCACTGAGAAGCAAGCAGCCACGTATATTTTGAGCCTCACAAGGGCATTGGCATATTGTCATGAGAAGCATGTTATTCATAGGGATATCAAGCCAGAAAATTTGTTGCTTGATCATGAGGGTCGTCTTAAAATTGCAGACTTTGGTTGGTCTGTACAATCTCAAAGCAAAAGACATACCATGTGTGGTACATTGGATTATTTAGCACCTGAAATGATAGAAAACAAAGCTCATGATTATGCAGTTGATAACTGGACTCTAGGTATCCTTTGTTATGAGTTCCTATATGGTGTTCCTCCTTTTGAGGCTGAGAGTCAAGCTGATACCTTCAAAAGGATAGTGAAAGTTGACCTATGCTTCCCTTCTACGCCTTTTGTTTCTTCAGAAGCCAAAAATCTGATTACTCGGCTCTTGGTGAAAGACTCCTCGCGAAGGCTCCCACTTCAGAAGATAATGGAGCATCCTTGGATAAGCAAGAATGCAAATCCTTTGGGTACCTGCAAGTAG 834 0.4149 MEEENTKSQWSLHDFEIGKPLGRGKFGRVYVARELKSKYVVALKVIFKEQLEKYRIHHQLRREMEIQSNLLHPNILRLYGWFHDAERVFLILEYAHNGELYKELRKRGHFTEKQAATYILSLTRALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSQSKRHTMCGTLDYLAPEMIENKAHDYAVDNWTLGILCYEFLYGVPPFEAESQADTFKRIVKVDLCFPSTPFVSSEAKNLITRLLVKDSSRRLPLQKIMEHPWISKNANPLGTCK* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1714 277 CDD STKc_Aurora 14 266 - -
Dod08g1714 277 Pfam Protein kinase domain 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1714 277 ProSiteProfiles Protein kinase domain profile. 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1714 277 PIRSF ILK 2 263 - -
Dod08g1714 277 SMART serkin_6 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1714 277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Dod08g1714 277 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 5 273 IPR030616 GO:0004672
Dod08g1714 277 Gene3D Phosphorylase Kinase; domain 1 3 98 - -
Dod08g1714 277 Gene3D Transferase(Phosphotransferase) domain 1 99 275 - -
Dod08g1714 277 SUPERFAMILY Protein kinase-like (PK-like) 9 270 IPR011009 -
Dod08g1714 277 ProSitePatterns Protein kinases ATP-binding region signature. 21 48 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1714 Dod-Chr8 40705667 40708641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1714 1 271 CBL-interacting serine-threonine protein kinases AT5G25110 38.267 5.73e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Dod08g1714 Pkinase 9.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1714 K08850 - gmx:100800111 507.294