Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1711 ATGCAAGACCCTGTTTACCCCAGCCTTCATCATTCAAGCAATCATGGTGATGCGGGAAACTCATTTGTGGCTCTCCTTTATGGTCCTCCATCCTTGTTACAGTGTGATTTCCAGGAGTTGTCTGATCGAAAACTTTACACTCTGTCTGGTAATTCTACTGCCACTAGTGGGAATTTTGCTGTTGATTCTATGGAAGGGGGAACCTTCCCAACATCTAGTTGTGGGCTCATAACAGGACATTTAAATAATCATAACTTGCAAAGCAGGCTGGATGCTATTCCAGATATTTCTTCTAGAGCAATGGTTGGTCTGAGTAGTAGTAGTCATTCTGTACTTCATGATATTCATAGTAACATTGCTGGCCAGCCTGCATTTCCTGGTGGCGACAAGGCAAGGGAGCCTTTTACTTATAGGAACCAATGGTGTGGTACAAGCCATGCATCTAGTCTAAATGTTTGTGGCTCAGATACTCAAACCATGCCAAGTATGGCTGTAGAACAATGCTCTTCTAAGCATAATTCTCTTTTTATCAGTGGGTGTCCTCGTGTGTTCTGCAGGGGAAAAAGTGGCTATCTTCTTCTCAGTAATACAGGGCTTCTTGGTATTGTTTGCTCATGCCACTGTCTCCATATGTCTGTCCTTAAGTTTTGTGAGCATTCAGGTTTACATGGCATCAACCCGGCGGATGCTGTTCATTTGGAAAGCGGTGAGACCATTGCACAATGGAAGAAATTATACTTCTTAAAGTTTGGGATTAGGTCTCCAGGCAATGAGAGTGAATGGGACTGGCCAGAAGTATTATCAACAACAGGAAGTCGGATGAAATCCAATGCATCTGCATCCAATATTTCCAAGACTGATTCTTCTCATATTTTCAGTTCATCTGCAGCCATGTTAAGAAAACAACCGACTACAATACAGGAAGGTTGCGACATTCTGCTCAAAGATTTTACTGGTATTTCACAAAACAACTTGTATGACCGTGTGAAAAGCCAGATAAAGGATTCTATTATAGCTGCACGTACAACTGCACCGAACTTTGTCAGAACTCAACTGGATGATGGTTGTCAACCCACACCACCTTTGCTTGATTCTCTTAAAAGGAATGACAGTTTGTCAATTGTCCACTCTCCTTCACAAACCCCAACAAGCCTTCTGAAAGACCAAGAATGCTTCAAAACTAGTCATGCAAAAGATGTTCTTGTAGGCAAAGATGCAGCTTCCTCCAATATTGAGCTTAGGCTTGGTCAACCACCTCAGACAGGAAATCCAGTTCCATCATTTATAGAACCGCCATTATTTAATGCCCATGGCAGTCCTCCAAAATTGCATCCTCTGAAGCAGATGGTTAATATGCTTGGCGGGGAGGAGGAATTGCTGAACAATTTGTGCCATGCTGCTGGTTCACTCAAAATGGTTGAAGAACTACCTCAGCTCAGGAACTATATGTCTGGTGTTAGTTATGGTTTATGTCGTGCTAGAGCTAGATCAGAAACTGAAAATGTGGCCAGGGGTTTATCGTTTTCACCATTGCCACAGTTAAAACCTCAATATGAGTTGAAGACAAAAGCTAGTGAAATTTTGGTGAATGGGCCTATCATGGCCAAGAAACAGCATTCTGAATTTAGTACCATGCAGGTTGGTCCTACTAATGTTCTCTGGAATAGTAATGGTCACAAAGGAAGGCAATTAAATAGTTCTGCAATAGGCTCTGTTAAAGTTTTGGACAATGATAAAGGTGCTAGCTTTGCTAAAGACTCACATGCGAAATTATTTGGAATTAGTAAGTTCGTAGAATATGCAAGCTCCATCACAACAGCTGTTGGTGGCAGTGATAGTTGTATTTCAACTGTTAATGGTAAGACATGTCAATCACATAATGAATCAAGCTTGCCATCAGATACATCAAATCAGGCTCCAACTTCACTACAGCAACAGGGCATTAATATGGACACTCCTTTACTTGATGAAAATATGAGGTTTATTGCGTTGACACAAATACTGGAGTTATCTAAGCAGCAGCATGCATTGCATTTTCATGAAATGAGTCAAAAGCAAGGAGGATCCGGCTACATTTCAGAAGTTCAACCCTCTGAATGTGAGACTTCAACATATGAACAGTTTTCTTCTGGTGCTACATTGAAATTGCCACAAAATAGAGGGACTTGTGGGAATCCTAACGCTACTGATGATTTAGAGAAGCTGGCTTCCCTCACAGGTTTGGACAAGTATTGTCTCTCCTCCTTGGCACCAATTCCTTTACATTCTAAAGAAAAGGAATCATACTGTAAACATGTTTATGATCTTCAAAATGAAGAGCCATCATTGAGCCTTGGAATAGACAAAGACAATACCAGATCAAGTGCATGTGAAAATTGCACTGAGAAACCAATGGATATAAATTTGGTAGGTAAATACAGTTGTGCTGCTCAGGTAAATTGTTCCCCAAGTAATTTTTTCTCAGGAATTGGGCCTTCTTGTTATACTTTTAAACAACAATTTGCAAATGCCGGTGGTGAAACTTCTCTGAAGATAGCTTCAAAGTTTGGTAAAGATCAAAATGCTTCAAAGGATGAAAGTATCCCCTTTGAGCAAGGTGGGAAATTAGATGGTCAAGACTCGATCAAAATTGGCTCTTGCACACATCAGTGGAAAGATGTACCAAGAATGGTCAGGCAAGCAGATTATGATGCAATATCTTTAGGTCGGTCAGCTACTACTTTGGGTTGTGAAGGACAACATGTAAACACTCCTGATAAACTCTTAAAAAGAACTATTAATATGGAAGACCTGTTGAAGGAGCAAGTAAATTCCAATGTTTCTTCCAGATGTTCTGCCCCTGTTGTTACTCAAGCATCTGTGAAGTTCAACATGGTTGATTCTTGTACTAGTGATGCTGTAGACCCTGGTTATGGCAACAACCTTGTAGTTGATGAGGGTTCAGGAATTGATATAGGTTGGTCACCTAATGTGGTTGAAAGTGAAAGAAGTGCTGAGTTTCTTGGCTCTACATGCGAGAGTTACTTGAACAAGGGTTATTTGAGAGTCTTAAATGATCAACCATGTCGCAGTCTCCTTGATGAGCTTAAATTGTTAGATTCTTTGACATGGAAGAAAGGCCGGGACCGAAGTGATATAATGCTTTCTGTTAATTGTAAAGCTAATCCATCTCAAAAACTCAGAAAGGACTTAAGAGGAAAAAAGCGAAAGAGAAATAGGGTGAGGAGTCTAGAAACTTCATCGTCTTCTAGAACCCCTTCCTTATTGCATAACAAGAATGCTGATAATACTGCAGTTTTGAATTTCTCTTCCTGTTTGTCCAAAGGAATGCAAATGTACTTTCCATCTAGCCAGCATCGATCATCTACTACGGCCTCCTTTTTTCATCCTAATACCAAACAAAAGCAAACTGCATTTTCACCCAAAATCCTTTCTTGTAAGAACTTTCCAATCAAGCATCACAGTGACAAAGAAGATAGCTATGTTTCAGAATCAAATTCTGATGCTGAGTTTCACTCTTTGCCTGAAGTTTCTGGAAGAAAGAAACTAAGAGCAGACTTCACTTCTGATTGTCACTTCCAAATGCAGGACCCAGCTTGTAAGGAACCTGAAAATGCCAAGCTGAGGTCATTGTCTAGCAGGAGGACAAATGGTTATTGTATCACAAGGCCAATAGTATGTGGGGAATATGGTGAAATATGTAGTGGAAACTTGGCTGGAAAAGTGCTGAAACCAGCAAAAATAGTTTCTCTTAGTAAGGTTCTTAAAACTTCTGAAAAACGTGTGGTTCCTATAAATGGCAAACCTAGAGTAACTTCAAAAAGGAAATGGAAGAGATTTAGCTTTGCAACAAGTAGTGAGCGCTGCTATGGGCAACCTGCTTCAAAAACTAAGGAAGATAGTGAAACCCAAAAGACAGCAATTTGTGATGAAACAAACGTTAATGTATATATGGAAGATTTGGAAAGGGGCAACAAGCCACTTGTTATTTGCAAAGGGAAGAGAGAGACCAAAGTGAAGCAGGGTGATAGTCTTATAAACAGAACTGATGCTCCATCAGAGCTGAAGAGCAAGGAAATTCAGAAAGAGCGCAGCATTTATGAACTCACTGCTAAAGAAACCAAAGCGAAAGATATTTTGGGGTATGCTGAAGATAGGGAGCATGGTTTGTGTAACACGAAAAGTAGAAACTTTGTTCAAGAACACATGGGCATCACCATCCTAAATTCAGATGCTTTATGCTCTGTCTGCCAAAACTCAAGCAGTGATGACTTTAACTGTTTGTTGGAGTGTAGTCGATGCTTCATTAGAGTGCATCAGGCTTGCTATGGTATTTCCACACTACCTAAAAAAGGCCGTTGGTGTTGTAGACCATGCCGAACAAACTCAAAAGATATTGCTTGTGTGCTATGTGGTTATGGAGGTGGAGCCATGACTGGAGCGATACTGAGTCGCTCAATCGTGAAAAGCCTCTTAAAAGAGTGGAGCGTTGAGAAGGATGGAATGCTTAAGCATAGAACTTCACGTGAAGTTTTTGAAAGGGAAATAGATGCACTTGGTTCCTCAAAATCTGGACTAGAAGTTGACCAAACACGTGCTTTAATGCCTGAGAATGTAGAGACATCAGGATCAGACCTGTTGAAAGCTGAGGTGTCAGCAAATCAAATGCAACATGCCCCTCACTCTGTTAGTAATTTTAAGGTGCATAACAGCATTACAGCAGGAATTCTTGATACATCTGTAAAGCAGTGGGTTCACATGGTTTGTGGGCTATGGACTCCTAGAACAAGATGCCCTAATGTTGATACAATGAGTGCTTTTGATGTATCTGGTGTTACATGTCCCAGATTAGATGTGGTTTGTTCCATTTGCAATCGATGGGGCGGTTCTTGTATAGAGTGCAGGGTTGTTAATTGTTCTGTCAAGTTTCATCCTTGGTGTGCTCATCAGAAGAACCTGTTGCAATGTGAGACTGAAGGTGCTGATGATGAGAAGGTTGGATTTTATGGAAGATGTATGCTTCATGCTATGGACCCTAGATATCAGTCCAAGTATGATGATCCTATTGATGAGATGGGTAGCTTAGAAGAAAAGGAATTCACCTGTGCAAGGACAGAGGGATACAAGGGCCGTAAACGGGATGGTTTTCAGAATTATTGTTACAGTGCCTTAAAGACCAAGGGTGGATGCCATGTTCCTGAGGAACAGTTAAATGCTTGGATCCACATTATTGGGCAGAAATCGTGTTCACAAGGACTCCCAAAACCAGCATCAGACATTGAGCATGATTGTCGGAAGGAATATGCTCGATACAAGCAAGCAAAGGGCTGGAAACACCTTGTTGTTTACAAATCTGGAATTCATGCCCTTGGTCTTTACACTTCTCGATTCATTTCCCGTGGTGAAATGGTTGTTGAGTATGTGGGTCAAATTGTGGGCCCACGCGTGGCTGATAAAAGAGAAATTGAATATCAATCTGGAAGAAAAGTTCAGTACAAGAGTGCTTGCTACTTCTTCAGGATAGACAGAGAACATATTATTGATGCCACAAGGAAAGGAGGAATTGCTCGTTTTGTTAACCACTCGTGCCTGCCAAATTGCGTGGCAAAAGTGATAACTGTAAGGCATGAGAAAAAGGTTGTCTTCTTTGCGGAGAGGGACATATATCCTGGTGAGGAGATAACATACGATTACCACTTTAACAACGAAGATGAGGGAAAGAAGATTCCATGTTACTGTAATTCCAAGAATTGCAGGCGCTATCTGAACTGA 5772 0.409 MQDPVYPSLHHSSNHGDAGNSFVALLYGPPSLLQCDFQELSDRKLYTLSGNSTATSGNFAVDSMEGGTFPTSSCGLITGHLNNHNLQSRLDAIPDISSRAMVGLSSSSHSVLHDIHSNIAGQPAFPGGDKAREPFTYRNQWCGTSHASSLNVCGSDTQTMPSMAVEQCSSKHNSLFISGCPRVFCRGKSGYLLLSNTGLLGIVCSCHCLHMSVLKFCEHSGLHGINPADAVHLESGETIAQWKKLYFLKFGIRSPGNESEWDWPEVLSTTGSRMKSNASASNISKTDSSHIFSSSAAMLRKQPTTIQEGCDILLKDFTGISQNNLYDRVKSQIKDSIIAARTTAPNFVRTQLDDGCQPTPPLLDSLKRNDSLSIVHSPSQTPTSLLKDQECFKTSHAKDVLVGKDAASSNIELRLGQPPQTGNPVPSFIEPPLFNAHGSPPKLHPLKQMVNMLGGEEELLNNLCHAAGSLKMVEELPQLRNYMSGVSYGLCRARARSETENVARGLSFSPLPQLKPQYELKTKASEILVNGPIMAKKQHSEFSTMQVGPTNVLWNSNGHKGRQLNSSAIGSVKVLDNDKGASFAKDSHAKLFGISKFVEYASSITTAVGGSDSCISTVNGKTCQSHNESSLPSDTSNQAPTSLQQQGINMDTPLLDENMRFIALTQILELSKQQHALHFHEMSQKQGGSGYISEVQPSECETSTYEQFSSGATLKLPQNRGTCGNPNATDDLEKLASLTGLDKYCLSSLAPIPLHSKEKESYCKHVYDLQNEEPSLSLGIDKDNTRSSACENCTEKPMDINLVGKYSCAAQVNCSPSNFFSGIGPSCYTFKQQFANAGGETSLKIASKFGKDQNASKDESIPFEQGGKLDGQDSIKIGSCTHQWKDVPRMVRQADYDAISLGRSATTLGCEGQHVNTPDKLLKRTINMEDLLKEQVNSNVSSRCSAPVVTQASVKFNMVDSCTSDAVDPGYGNNLVVDEGSGIDIGWSPNVVESERSAEFLGSTCESYLNKGYLRVLNDQPCRSLLDELKLLDSLTWKKGRDRSDIMLSVNCKANPSQKLRKDLRGKKRKRNRVRSLETSSSSRTPSLLHNKNADNTAVLNFSSCLSKGMQMYFPSSQHRSSTTASFFHPNTKQKQTAFSPKILSCKNFPIKHHSDKEDSYVSESNSDAEFHSLPEVSGRKKLRADFTSDCHFQMQDPACKEPENAKLRSLSSRRTNGYCITRPIVCGEYGEICSGNLAGKVLKPAKIVSLSKVLKTSEKRVVPINGKPRVTSKRKWKRFSFATSSERCYGQPASKTKEDSETQKTAICDETNVNVYMEDLERGNKPLVICKGKRETKVKQGDSLINRTDAPSELKSKEIQKERSIYELTAKETKAKDILGYAEDREHGLCNTKSRNFVQEHMGITILNSDALCSVCQNSSSDDFNCLLECSRCFIRVHQACYGISTLPKKGRWCCRPCRTNSKDIACVLCGYGGGAMTGAILSRSIVKSLLKEWSVEKDGMLKHRTSREVFEREIDALGSSKSGLEVDQTRALMPENVETSGSDLLKAEVSANQMQHAPHSVSNFKVHNSITAGILDTSVKQWVHMVCGLWTPRTRCPNVDTMSAFDVSGVTCPRLDVVCSICNRWGGSCIECRVVNCSVKFHPWCAHQKNLLQCETEGADDEKVGFYGRCMLHAMDPRYQSKYDDPIDEMGSLEEKEFTCARTEGYKGRKRDGFQNYCYSALKTKGGCHVPEEQLNAWIHIIGQKSCSQGLPKPASDIEHDCRKEYARYKQAKGWKHLVVYKSGIHALGLYTSRFISRGEMVVEYVGQIVGPRVADKREIEYQSGRKVQYKSACYFFRIDREHIIDATRKGGIARFVNHSCLPNCVAKVITVRHEKKVVFFAERDIYPGEEITYDYHFNNEDEGKKIPCYCNSKNCRRYLN* 1924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1711 1923 MobiDBLite consensus disorder prediction 1057 1090 - -
Dod08g1711 1923 ProSiteProfiles Post-SET domain profile. 1907 1923 IPR003616 -
Dod08g1711 1923 SMART PostSET_3 1907 1923 IPR003616 -
Dod08g1711 1923 SUPERFAMILY FYVE/PHD zinc finger 1408 1464 IPR011011 -
Dod08g1711 1923 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 10 1923 - -
Dod08g1711 1923 Pfam PHD-finger 1426 1460 - -
Dod08g1711 1923 SMART set_7 1778 1905 IPR001214 GO:0005515
Dod08g1711 1923 Pfam SET domain 1791 1898 IPR001214 GO:0005515
Dod08g1711 1923 Pfam PHD-zinc-finger like domain 1579 1662 - -
Dod08g1711 1923 MobiDBLite consensus disorder prediction 621 641 - -
Dod08g1711 1923 SMART PHD_3 1620 1676 IPR001965 -
Dod08g1711 1923 SMART PHD_3 1413 1460 IPR001965 -
Dod08g1711 1923 ProSiteProfiles SET domain profile. 1778 1899 IPR001214 GO:0005515
Dod08g1711 1923 Gene3D SET domain 1680 1923 IPR046341 -
Dod08g1711 1923 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1562 1677 IPR013083 -
Dod08g1711 1923 SUPERFAMILY SET domain 1770 1919 IPR046341 -
Dod08g1711 1923 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1401 1474 IPR013083 -
Dod08g1711 1923 ProSiteProfiles Zinc finger PHD-type profile. 1411 1462 IPR019787 -
Dod08g1711 1923 CDD ePHD 1577 1666 - -
Dod08g1711 1923 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 10 1923 - -
Dod08g1711 1923 CDD SET_SETD1-like 1780 1919 - -
Dod08g1711 1923 ProSiteProfiles Extended PHD (ePHD) domain profile. 1562 1676 IPR034732 -
Dod08g1711 1923 Pfam Tify domain binding domain 199 245 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1711 Dod-Chr8 40668333 40686444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1711 1780 1923 C2H2 Transcription Factor Family AT2G23740 32.927 2.40e-15 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod08g1711 SET 8.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1711 - - gmx:100812602 2401.71