Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1665 ATGATCATGGAATCTCCAGAACCTTCCAAGAATAATGCAAGTTGTTGTTGTTCTTCTTCTTCTGCCTCCACAATCAATGCCGTCCCCAACACTGATTCCCCTCAAGTGCAAGAATCGCCCTTTTTCAGGTTTGTAAACAATTTATCTCCAATAAAGCAACCTGTCAAGGCTTGTCATGTGACACAAGGCTTTGTTGGACTCAATTCTCCACCTCTTGTATTCACATCACCGCGTATTAGCTCTCACCGTGAAACACAGTTCTTGGGAAGGCCTCCATGCACTCAGTCACCCGGTGGAGAAGTATCTCAAAGTGATAATAGAGGCAAGAGTCTTATTGAAGCTCCTGGTGATTCCAAGAGATCAACTGCTCAACTGCCACCGCCAGTAAAGTTAATAACTGACACTCAGAAGGATTTTGATGTCAAGAATGATTCAAATACCCAACATTGCAGTCCTCCACCATCAGTTGATGAATATTTGGCTGACCCTGTGGATATTGATCAAATGTATTCAGCCAACCCAGATGTGAAACAATCTAATGATGCTGAAGTAGTATCACTGAGTGACTTAACTCAGTCAAAGAAAATTGTATTGGAAACTGATAGCAAAGATGGTGCTGGTGATAAAGCAGATGAACCTTTGCTTTTGTTAGAGGAATCAAATAAGGTTCAAAACAAGCCAGCATATGTTGAAGAACCAGGTCAAATAGAGGGGGAGAATAAAGATGTTGAATGGGCTTCTCAAGAGTGCACAAAGTTAGAGTCCAATACTCCTGCAGATGATTTTGAGAAGCATCATAATTTTGATTCACTAGCCCAGTGTGCAGGAAATGAACAGCTGGATCATAATGATTGTACACCTCAGTTGATGCTTGAACAGACTCTGCAGGATCTTAAAGAATGTGAAGATTGTGATGAGGTGGTGTCAACCTCACATGCAGGAGCTGAGAACATCTCACAAGATGCTTCTGAGGCTAGTCTAAAGCAGCATGCCCTTCGTAGGCGCTGCCTACAATTTGAGGAAGCTGCATCAAATGCTCTTGGAAGTAATAAGTCTCATATGAACTTGAATGCAACTTCAAGCAAAATGAAAATGGTCAAGCTGTCTGAACCTGTCACTTCCTTGTTTCCTCAACGAAGTAGTGGAAACATACCAGCGACATGTTCCAAGCCATCAGGTATTGGGTTGCATTTAAATAGCATTGTAAATGCTATGCCGCCTGGTCGGGTTACAACAACAGGTACGAGATCATCAGATGGTTTAGCTGGGATGAAAACCACATCTTCAATTAGCTTACATAAACTAGAGATCACGAAGAGATGCATCATTTCATTGAATATGGATGGGCAATCATCAATTGATATTGGAAATGAGAGCCAGGCAAATGATGCCTCAATAGCTGCAGATTCTGTCATTTCTGAGTCTAGCCTTCCAGAACCAATTGTCCTATGTCCTGAAAGTCTCCATGATAAGAGGAAACTATGCCCTACAGATGTTGGAAATCCTGAGGAATTCAAGCCACCTAGCCCCAGCAAGAAAAAGAAGAGAACATCAAACAACTCTGATGACAATGGATGTAAAAGATGCAACTGTAAGAAGAGTAAATGTCTGAAACTTTATTGTGATTGTTTTGCTGCTGGAATCTATTGTGCCGACCTTTGTTCCTGCCAAGGCTGTTTAAACAGACCAGAATATGAAGATAAAGTTCTTGAAACAAGGAAACAAATTGAATCCCGTAATCCACTTGCTTTTCTTCCCAAGATTGTTCCGCAAGCCACCGATCTTCCATCAAGTAACACGGAGGATACAAATCTGATGACACCATCATCAGCTAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAATGTGCCTGAAAAAATATTGTGAATGTTATCAGGCTAATGTTGGATGCTCTAGTGGTTGTCGATGCGAGGGATGTAAGAATGTCTATGGCACAAAAGAAGAGTATGTTGCAAGGGATCATGCTTTGAGTAAAGACAGGGTGAGCAGCAGGGTTGAAGATGGATCAGATAGCACTTTTCTCAACAAACTTGAAATGGTAGCAAGCAAGACAGATTTGTATGACCTACGCCACCTCTCGCCTATAACACCATCATTGCAATGCTCTGACCAAGGAAAGGAGGGTGCAAAATCCCGACTTCATTCTGAAAAACACCTACCATCCCCCGAATCTGATGTCAATATGTTTCCATCTAGTGCAAAATACAGTAAGTCTCTGGAAAATGCACACAACAGTCTTCCAAATCTGGAAACAAATGAGATGTTGGGAACTGCCTCCTATGATTGGCAAGTGGATGGCAGCAATGTAGACATAATCGATCAATCATCCCCATGTAATTCAATATCCAACATACTTCAGGTTACTCCTCTGTCTGATCCTGAATCAATGTCTAGTGCTTCATTATTACTGTCAAACACAAAGGAGTGTACAAATGGACCTGAATTCCAATCCCAAGGATGCATTCGCCAGTTATCCAGCAGCTCTCTTCGTTTGCGAAGCTCACCAAATACCCCAAGCACTAGATTAGGTGAAAAACAATGTCTGCGGTCTCTTGATTCAGAAAGCAGGCTCTTTGACATTCTGGAAGATGAAACACCAGATATATTGAAGGAAGGTTCAACTCCCACCAAGACAGTCAAAGCAAATTCCCCTAACCAGAAGCGAGTTTCTCCTCCTCATAGTCATCTACGTGGACTTGGGTCAAGCTCCTCAGGAGGCTTTAGAAGTGGCAGGAAATTTATTCTGAAATCTGTTCCTTCTTTCCCACCATTGACCCCTTGTGTTGATTCGAAAGGCAATGGCAATGAGGATTTAGGTAACAGTGGCAGCAAGTGA 2859 0.4215 MIMESPEPSKNNASCCCSSSSASTINAVPNTDSPQVQESPFFRFVNNLSPIKQPVKACHVTQGFVGLNSPPLVFTSPRISSHRETQFLGRPPCTQSPGGEVSQSDNRGKSLIEAPGDSKRSTAQLPPPVKLITDTQKDFDVKNDSNTQHCSPPPSVDEYLADPVDIDQMYSANPDVKQSNDAEVVSLSDLTQSKKIVLETDSKDGAGDKADEPLLLLEESNKVQNKPAYVEEPGQIEGENKDVEWASQECTKLESNTPADDFEKHHNFDSLAQCAGNEQLDHNDCTPQLMLEQTLQDLKECEDCDEVVSTSHAGAENISQDASEASLKQHALRRRCLQFEEAASNALGSNKSHMNLNATSSKMKMVKLSEPVTSLFPQRSSGNIPATCSKPSGIGLHLNSIVNAMPPGRVTTTGTRSSDGLAGMKTTSSISLHKLEITKRCIISLNMDGQSSIDIGNESQANDASIAADSVISESSLPEPIVLCPESLHDKRKLCPTDVGNPEEFKPPSPSKKKKRTSNNSDDNGCKRCNCKKSKCLKLYCDCFAAGIYCADLCSCQGCLNRPEYEDKVLETRKQIESRNPLAFLPKIVPQATDLPSSNTEDTNLMTPSSARHKRGCNCKRSMCLKKYCECYQANVGCSSGCRCEGCKNVYGTKEEYVARDHALSKDRVSSRVEDGSDSTFLNKLEMVASKTDLYDLRHLSPITPSLQCSDQGKEGAKSRLHSEKHLPSPESDVNMFPSSAKYSKSLENAHNSLPNLETNEMLGTASYDWQVDGSNVDIIDQSSPCNSISNILQVTPLSDPESMSSASLLLSNTKECTNGPEFQSQGCIRQLSSSSLRLRSSPNTPSTRLGEKQCLRSLDSESRLFDILEDETPDILKEGSTPTKTVKANSPNQKRVSPPHSHLRGLGSSSSGGFRSGRKFILKSVPSFPPLTPCVDSKGNGNEDLGNSGSK* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1665 952 MobiDBLite consensus disorder prediction 495 524 - -
Dod08g1665 952 MobiDBLite consensus disorder prediction 507 524 - -
Dod08g1665 952 MobiDBLite consensus disorder prediction 83 109 - -
Dod08g1665 952 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 3 944 - -
Dod08g1665 952 MobiDBLite consensus disorder prediction 706 738 - -
Dod08g1665 952 ProSiteProfiles CRC domain profile. 525 652 IPR005172 -
Dod08g1665 952 MobiDBLite consensus disorder prediction 83 129 - -
Dod08g1665 952 MobiDBLite consensus disorder prediction 871 952 - -
Dod08g1665 952 MobiDBLite consensus disorder prediction 834 853 - -
Dod08g1665 952 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 615 649 IPR005172 -
Dod08g1665 952 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 527 562 IPR005172 -
Dod08g1665 952 MobiDBLite consensus disorder prediction 715 729 - -
Dod08g1665 952 SMART CXC_2 612 653 IPR033467 -
Dod08g1665 952 SMART CXC_2 524 565 IPR033467 -
Dod08g1665 952 MobiDBLite consensus disorder prediction 879 916 - -
Dod08g1665 952 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 944 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1665 Dod-Chr8 39593318 39600473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1665 307 655 CPP Transcription Factor Family AT3G22760 38.286 9.69e-60 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Dod08g1665 TCR 5.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1665 K21776 - gmx:547664 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1665 08 39593318 39600473 Dod08g1665 08 39593318 39600473 ECH
Dod08g1665 08 39593318 39600473 Dod09g1755 09 39200197 39203543 PCT