Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1654 ATGTCTAGCGTTTCGAGCTCTTGGGGTACGGCGCTCGTTAAGATCTCCCCTTACACCTTCGCCGCCATCGGCATCGCCATCGCTATCGGCGTCTCCGTCCTCGGCGCTGCCTGGGGGATTTACATAACTGGTAGCAGCTTGATCGGTGCTGCAATCAAGGCTCCGCGAATCACTTCCAAGAATCTCATCAGTGTAATCTTCTGTGAAGCCGTTGCAATATATGGTGTTATTGTGGCTATTATTCTACAAACAAAATTAGAAAGCGTTCCTAAATCACAAATCAATGCACCTGAGTCTCTTAGAGCTGGATATGCAATCTTTGCTTCTGGAATTATTGTGGGCTTCGCAAATCTTGTTTGCGGGTTGTGTGTAGGAATAATTGGAAGCAGCTGTGCATTGTCTGATGCTCAGAACTCTTCTCTCTTTGTGAAGATACTTGTGATTGAGATCTTTGGTAGTGCACTTGGGCTATTTGGAGTTATTGTTGGAATTATTATGTCAGCTCAAGCAACATGGCCCACAACAGTTTAA 531 0.4539 MSSVSSSWGTALVKISPYTFAAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPKSQINAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTTV* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1654 176 CDD ATP-synt_Vo_c_ATP6F_rpt2 102 166 - -
Dod08g1654 176 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 3 174 - -
Dod08g1654 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 62 86 IPR000245 GO:0033179|GO:0046961|GO:1902600
Dod08g1654 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 36 60 IPR000245 GO:0033179|GO:0046961|GO:1902600
Dod08g1654 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 118 144 IPR000245 GO:0033179|GO:0046961|GO:1902600
Dod08g1654 176 PRINTS Vacuolar ATP synthase 16kDa subunit signature 145 168 IPR000245 GO:0033179|GO:0046961|GO:1902600
Dod08g1654 176 Gene3D - 18 173 IPR035921 -
Dod08g1654 176 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 174 - -
Dod08g1654 176 Pfam ATP synthase subunit C 23 82 IPR002379 GO:0015078|GO:0033177|GO:1902600
Dod08g1654 176 Pfam ATP synthase subunit C 107 166 IPR002379 GO:0015078|GO:0033177|GO:1902600
Dod08g1654 176 SUPERFAMILY F1F0 ATP synthase subunit C 16 85 IPR035921 -
Dod08g1654 176 SUPERFAMILY F1F0 ATP synthase subunit C 99 167 IPR035921 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1654 5 174 Primary Pumps ATPases(2) AT2G25610 92.353 3.55e-107 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1654 K03661 - han:110930060 298.901