Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1652 ATGGATAGTAATAGCATATCAAGAGTAGAAAGTCTTAGAACAAATAGTTCTAACATCTGGAGGAACAATAGCATGGATGTTTTCTCAGCATCTGAACGTGAAGATGATGAAGAAGCTCTCAAATGGGCTGCAATAGAGAGGCTCCCAACATATCTACGCATTAGGAGAAGTATGCTGAACAACTCAGAAGGGAAAAGAGTAGAGGTTGACATCAAGCGACTGGGACTAACTGAGAGAAAGATTCTGCTAGAGCGACTAGTGAAGATAGCAGAAGAAGATAATGAGAAGTTTTTGTTGAAACTCAGGGAGAGGATGGACAGAGTTGGTCTTGATATTCCAACAATTGAAGTTCGATTTGAGCACATAAATGTGGAAGCTCAAGTTTATGTTGGAAGAAGAGCACTGCCTACGTTATTCAACTTCTTTGTGAATGTGCTAGAGGGATTCTTGAATTATCTGCACATCATTCCCAGTCCAAAGAAACCTTTACATATCCTTCAGGATGTTAGTGGAATCATAAAGCCAAGAAGAATGACTTTATTGTTAGGGCCCCCTGGCTCAGGCAAAACCACTTTGCTGTTGGCATTAGCTGGTAAACTTGGGAAAGATTTGAAATATTCTGGGAGAGTAACATACAATGGGCATGGGCTAGAAGAGTTTGTGCCACAAAGGACATCAGCTTATATAGGCCAACATGATAACCACATTGGAGAAATGACTGTGAGAGAAACGCTAGCATTCTCAGCAAGATGTCAAGGGGTTGGACAGAATTATGAGATGTTGACTGAACTATTGAGAAGAGAGAAGGAAGCAAAGATTAAACCAGATCCTGATATTGATGCCTACATGAAGGCAGCAGCACTAGAAGGACAGCAGACAAGTGTGGTCACTGACTATATTCTTAAGATTTTGGGACTTGAAATCTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGACAGAAAAAGCGAGTCACCACAGGTGAGATGCTGGTTGGACCTATAAGGGTGTTGTTTATGGATGAAATATCAACTGGTTTGGACAGTTCCACAACTTTTCAAATCATCAACTCAATCAGGCAATCCATCCATATCCTCAATGGAACTGCACTTGTCTCTCTGCTACAGCCAGCACCAGAAACCTATGAGCTATTTGATGATATAATACTTCTGACAGATGGGAAAATAGTGTACCAAGGACCTAGAGAAAATGTGCTTGATTTTTTTGAGTCAATGGGGTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTACAAGAAGTGACTTCAGGAAAAGATCAATGGCAATATTGGGCACGCAAAGATGAACCTTACAGCTTTGTCACTGTCAAGGACTTTGCAGAAGCCTTCCAGCTATTCCACATTGGTCAAAAACTTGGAGACGAATTGGCCACTCCTTTTGACAAGTCTAAATGCCATCCAAATGCCTTGACAACAAACAAGTATGGTGTTAACAAAAAGGAGCTACTGAAGGCATGTGCTAGCAGAGAATTTTTGCTTATGAAGAGAAACTCATTTGTATACATATTCAAAGCCGCCCAACTAATTTATTTAGCTATCATGGAAACAACATTATTTCTACGAACTAAGATGCACAAGGATACGGTGGAGGATGGAGGAACTTACTTGGGTGCACTTTTCTTCGCTGTAACTGTAGCTATGTTCAACGGAATATCAGAGCTAAACATGGCCATCATGAAACTTCCTGTCTTTTACAAGCAAAGGGACCTTCTTTTCTATCCTGCATGGTCCTATTCTCTTCCTCCTTGGATCCTCAAAACACCAATAACCCTTATAGAAGTTGTCATCTGGGAAGCCATCTCTTACTATTCTATTGGCTATGATCCAAATTTTGGAAGGCTTTTGAAACAGTACTTGGTAATCCTTTGCATTAACCAGATGGCATCTTCACTTTTTCGGTTGATGGCAGCATTAGGAAGGGATGTTATAGTTGCAAACACTGTCGGTTCGTTTGCATTACTTGTAGTTTTGGTTTTAGGAGGATTTGTGATTTCAAGAGAGGATGTGCATAAATGGTTCCTGTGGGGTTACTGGTCCTCACCACTGATGTATGGACAGAATGCTATTGCTGTTAATGAATTTCTTGGGCATAGTTGGAGAAAGGTTACTCCTGGTTCCAATGAAACACTGGGAGTTTCGATACTGAAATCTCGTGGACTTTTCACAGAAGCTTATTGGTATTGGATAGGAGTAGGAGCCTTGATTGGTTTTGTTTTTCTATTTAATTTTCTCTTCACCTTGGCTTTGCAGTATCTTAGTCCATTCAAAAAGCATCAAGCAGGGTTATCCCAAGAGAAATTGCTCGAGCGAAACTCTTCAACTAGTGATGAGTTAATTCAATTCAAGAGCTCTTCTGAAACAAAGATGGTAGAAGAAGCAGGCATACTATCCCGGTCGTTTTCTGGAGGATTTAGTGATTATAAGACTAGTAGGAGTGGAAGGAAGGGCATGGTTCTTCCTTTTCAACCTCTATCCCTAACTTTTGATGAGATAAGATATTCTGTAGACATGCCACAGGAAATGAAAAACCAAGGAGTTTTCGAGGATCGTCTTGAACTTTTGAAGGGAGTTAGTGGTGCTTTTAGGCCTGGAGTACTAACAGCTCTGATGGGTGTAAGTGGAGCAGGAAAGACTACTCTGATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATACATAGATGGAAGCGTCAAAATATCTGGATATCCAAAGAATCAACAAACATTTGCTCGCATAGCAGGATACTGTGAACAATTTGATATCCACTCACCCTATGTTACAGTGTATGAATCTTTGCTATATTCTGCATGGCTTCGATTACCTCATGAAGTTGATCATGCAACAAGAAAGATGTTTATTGAGGAAGTTATGAAGCTTGTGGAGCTTAACTCATTGAGACAAGCACTTGTTGGATTGCCAGGAGAGACCGGACTTTCAACCGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAACCCATCAATAATTTTCATGGATGAGCCAACCTCTGGCCTTGATGCAAGAGCAGCTGCAATTGTAATGAGAACTGTGAGAAACACTGTGGACACAGGGCGCACAGTGGTTTGCACCATCCACCAACCGAGTATCGATATATTTGACGCCTTTGATGAACTGCTACTTCTGAAATTGGGAGGGGAGCAAATATATGCTGGTCCATTAGGCCGCCATTGTTCCCATCTGATTCAATACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAGAGATGGTTACAATCCTGCAACCTGGATGTTGGAAGTCACATCACCAGGAATGGAAGCAAGTCTGAATGTCAACTTCACTAATGTGTACAAAAACTCGGAACTATACAAGAGAAACAAACAATTGATCCAGGAGCTTAGTGTTCCTGCTGAAGGTTCAAAAGATCTATACTTTGATAGTCAGTATTCGCAGACCTTCTTGGCACAATGCAAAGCTTGCCTATGGAAACAGAATTTATCATATTGGAGGAACACATCCTATACTGCAGTTCGACTCCTATTTACAACAATAATAGCTTTATTGTTTGGGGTGATATTTTGGGACATTGGTATGAAAAGGAGAAAGGAGCAAGATCTTTTCAATGCAATGGGTTCAATGTATGCTGCTGTTTCTTTCATTGGTGTACAAAATGGTGCCTCAGTGCAGCCTATAATAGCAGTTGAGCGAACAGTGTTCTACAGAGAAAGAGCTGCAGGAATGTATTCAGCTTTGCCATATGCTTTTGCACAGGTTATTATTGAGCTCCCTCACGTCTTGGTTGAGTCTCTTATATATGGGGTTATAGTGTATGCCATGATGGGGTTCGATTGGACAACGTCAAAGTTCCTGTGGTATCTCTTCTTTACTTACTTCACTTTCTTATACTACACTTTCTATGGTATGATGACCATGGCCATAACTCCCAACCCACACGTTGCTGCCATATTGTCCAGTGCATTCTATGCAATATGGTCCCTTTTCTCAGGCTTCATCATTCCATTATCGAGAATACCCATATGGTGGAAGTGGTACTATTGGATATGTCCCGTTGCATGGACATTGAATGGATTGGTGGCTTCCCAATATGGAGACAACAAGCACAAACTTGACAATGGCCAAAGGGTTGACGAATTTGTGAGGAGTTACTTTGGGTTTGAACATGACTTTCTTGGAGTGGTTGCTATTGTGGTGGCTGGTTTCTCTGTGCTGTTTGCGCTCATATTCGCCTTTGGCATCAAAGCAATCAACTTCCAAAAACGGTGA 4332 0.4125 MDSNSISRVESLRTNSSNIWRNNSMDVFSASEREDDEEALKWAAIERLPTYLRIRRSMLNNSEGKRVEVDIKRLGLTERKILLERLVKIAEEDNEKFLLKLRERMDRVGLDIPTIEVRFEHINVEAQVYVGRRALPTLFNFFVNVLEGFLNYLHIIPSPKKPLHILQDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLGKDLKYSGRVTYNGHGLEEFVPQRTSAYIGQHDNHIGEMTVRETLAFSARCQGVGQNYEMLTELLRREKEAKIKPDPDIDAYMKAAALEGQQTSVVTDYILKILGLEICADIMVGDGMIRGISGGQKKRVTTGEMLVGPIRVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGKIVYQGPRENVLDFFESMGFKCPERKGVADFLQEVTSGKDQWQYWARKDEPYSFVTVKDFAEAFQLFHIGQKLGDELATPFDKSKCHPNALTTNKYGVNKKELLKACASREFLLMKRNSFVYIFKAAQLIYLAIMETTLFLRTKMHKDTVEDGGTYLGALFFAVTVAMFNGISELNMAIMKLPVFYKQRDLLFYPAWSYSLPPWILKTPITLIEVVIWEAISYYSIGYDPNFGRLLKQYLVILCINQMASSLFRLMAALGRDVIVANTVGSFALLVVLVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVTPGSNETLGVSILKSRGLFTEAYWYWIGVGALIGFVFLFNFLFTLALQYLSPFKKHQAGLSQEKLLERNSSTSDELIQFKSSSETKMVEEAGILSRSFSGGFSDYKTSRSGRKGMVLPFQPLSLTFDEIRYSVDMPQEMKNQGVFEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGSVKISGYPKNQQTFARIAGYCEQFDIHSPYVTVYESLLYSAWLRLPHEVDHATRKMFIEEVMKLVELNSLRQALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGRHCSHLIQYFEAIQGVPKIRDGYNPATWMLEVTSPGMEASLNVNFTNVYKNSELYKRNKQLIQELSVPAEGSKDLYFDSQYSQTFLAQCKACLWKQNLSYWRNTSYTAVRLLFTTIIALLFGVIFWDIGMKRRKEQDLFNAMGSMYAAVSFIGVQNGASVQPIIAVERTVFYRERAAGMYSALPYAFAQVIIELPHVLVESLIYGVIVYAMMGFDWTTSKFLWYLFFTYFTFLYYTFYGMMTMAITPNPHVAAILSSAFYAIWSLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVASQYGDNKHKLDNGQRVDEFVRSYFGFEHDFLGVVAIVVAGFSVLFALIFAFGIKAINFQKR* 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1652 1443 SMART AAA_5 175 400 IPR003593 -
Dod08g1652 1443 SMART AAA_5 883 1075 IPR003593 -
Dod08g1652 1443 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 9 1443 - -
Dod08g1652 1443 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Dod08g1652 1443 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1443 - -
Dod08g1652 1443 Pfam ABC transporter 166 348 IPR003439 GO:0005524
Dod08g1652 1443 Gene3D - 860 1095 IPR027417 -
Dod08g1652 1443 Pfam ABC-2 type transporter 502 714 IPR013525 GO:0016020|GO:0140359
Dod08g1652 1443 Pfam ABC-2 type transporter 1172 1385 IPR013525 GO:0016020|GO:0140359
Dod08g1652 1443 Pfam Plant PDR ABC transporter associated 719 780 IPR013581 -
Dod08g1652 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Dod08g1652 1443 Gene3D - 153 454 IPR027417 -
Dod08g1652 1443 Pfam ABC-2 type transporter 381 438 IPR043926 GO:0140359
Dod08g1652 1443 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 846 1098 IPR003439 GO:0005524
Dod08g1652 1443 CDD ABCG_PDR_domain2 843 1081 IPR034003 -
Dod08g1652 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 862 1083 IPR027417 -
Dod08g1652 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 423 IPR027417 -
Dod08g1652 1443 Pfam ABC transporter 874 1026 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1652 Dod-Chr8 39141118 39151471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1652 871 1058 Calmodulin-binding Proteins AT2G36910 27.586 3.23e-06 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1652 08 39141118 39151471 Dod08g1652 08 39141118 39151471 ECH
Dod08g1652 08 39141118 39151471 Dod09g0947 09 29370751 29379391 PCT