Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1645 ATGGCTCAGCATAACAATGCCAACTACACTAACAACATCAACAACATTGCTAGCCAACAACTACAGCAAAAGCAACAGCAAGAACAGAAACAGCAACAGCAACAACAACAAGAAGAGCTAGTGAAAGTGAAGCCTGTGTTCCATGACTTTCTTGGCAGGAAGAAGAACCCCATCACTGAATCCTCTGCCCTTTTGGCCCCTAAGACCCTCCATGTCAGTAGAACGTCTGATCCTGACCCCTCTTTCTCTTCCACCACCGACATCGGTTCCGAAAGACAGGAAGGAAATCATCTTGAGGGAGTGCCATTCTATGGCTTGAGCAGGGACTTTTCTGGCTCTGAGATAAGTAAGAAACTAGTCAGAAACAATATATCCGATTCCACTTTTTTGGGTTCATCTAGAGATGCCTTGCAAATGCGCCCTGAATCCCTTCAAAACTCACATTTGTTGAAGATGGTCCAGAATGCAGCTGGAGGTGAGCGGCTTAGAAGGTCCAATGATGATGAAGTGTTCCTTGGTATGCCATCAAGGAAGCCAAGTTCTGGCTCTCAGATATTTCAGTCTCTCCCTGCCACTAAGATTGACGCCAATATATGGGAGCAATCTATTATCATGAATGTTGGCCCTTGCATGCAGCACCAACCACGTGGGCGTCAAGCACCCTTTGTGCACCATATAACTTCTAATAAGATGAAGGATACCAATGCTGGTCCTTCATTTATCTCTCAGTCAGCTTCTGATGAAGGATCTAGAACTGGAATAAAGGGCCCTGGGATTTTGAATTCTATAAATGCAACCAATGCTGCCACGGAGAAGACTTCATCTGCAGAGCTGCTTGGTGGCAGCAGAACAAACCCTGTGACTAATATAATAGACCCAGAATCTTCGACATTGCTTAGCCGACATGGGACAACACATTTCAGCTGTCGGATGACTATTTTTTATGGAGGTCAAGCTCATGTATTTGATGATGTCCAGCCTAATAAGGCAGATGTTATAATGGATTTAGCTGGGTCAAATGGCGGATCTTGGTCCACGACAATCTCACCAAAATCTGCTGTAAAGCTGGTTAATGATAGTAACTTGCTTGTTGGAGAAAATGAAACAGCTATAGCAAGTAATTTGGCTCTCCCACAGGATCGTCATGCAAGATTGCTTATTACTGGGAGTTCTACTCATGCCATTGGCGCTGGTGATCGACTAACTACTGCGGCAGGGGCGCATCAAGGAAGCATTGTAGCTAAGGATACAAGAAATACAGTCCAGGCAGAAAATACCATTTCTGGAGACAAAAGAGCATAA 1302 0.4462 MAQHNNANYTNNINNIASQQLQQKQQQEQKQQQQQQQEELVKVKPVFHDFLGRKKNPITESSALLAPKTLHVSRTSDPDPSFSSTTDIGSERQEGNHLEGVPFYGLSRDFSGSEISKKLVRNNISDSTFLGSSRDALQMRPESLQNSHLLKMVQNAAGGERLRRSNDDEVFLGMPSRKPSSGSQIFQSLPATKIDANIWEQSIIMNVGPCMQHQPRGRQAPFVHHITSNKMKDTNAGPSFISQSASDEGSRTGIKGPGILNSINATNAATEKTSSAELLGGSRTNPVTNIIDPESSTLLSRHGTTHFSCRMTIFYGGQAHVFDDVQPNKADVIMDLAGSNGGSWSTTISPKSAVKLVNDSNLLVGENETAIASNLALPQDRHARLLITGSSTHAIGAGDRLTTAAGAHQGSIVAKDTRNTVQAENTISGDKRA* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1645 433 SMART tify_2 304 339 IPR010399 -
Dod08g1645 433 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 72 432 IPR040390 -
Dod08g1645 433 MobiDBLite consensus disorder prediction 69 97 - -
Dod08g1645 433 Coils Coil 14 43 - -
Dod08g1645 433 Pfam tify domain 310 338 IPR010399 -
Dod08g1645 433 ProSiteProfiles Tify domain profile. 304 339 IPR010399 -
Dod08g1645 433 MobiDBLite consensus disorder prediction 69 91 - -
Dod08g1645 433 PANTHER PROTEIN TIFY 8 72 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1645 Dod-Chr8 38686093 38692392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1645 33 337 Tify Gene Family AT4G32570 34.675 6.39e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod08g1645 tify 1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1645 - - gmx:100819293 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1645 08 38686093 38692392 Dod09g0965 09 29876976 29883302 PCT